Os07g0133100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Legume lectin, beta domain containing protein.
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Os07g0133100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Legume lectin, beta domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211.18 | 0.683 | 7.42 | 2.05 | 2.1 | 2.82 | -0.914 | -1.69 | 0.566 | 23.8 | 21.45 | 6634 | 3.96 | -- |
| 214.54 | 0.682 | 7.34 | 2.58 | 2.12 | 2.95 | -0.604 | -- | 0.696 | 23.7 | 21.3 | 6535 | 3.29 | -- |
| 213.82 | 0.681 | 7.38 | 2.22 | 2.18 | 2.95 | -- | -1.11 | 0.643 | 23.9 | 21.37 | 6526 | 1.79 | -- |
| 215.1 | 0.683 | 7.33 | 2.48 | 2.22 | 3.15 | -- | -- | 0.721 | 0.0348 | 21.32 | 6498 | 0.745 | -- |
| 467.73 | 1.01 | 7.34 | 2.23 | -- | 2.82 | -- | -0.967 | 0.629 | -- | 21.59 | 10111 | 2.05 | -- |
| 487.7 | 1.04 | 7.05 | 4.47 | 2.03 | -- | -0.997 | -- | 1.93 | 0.249 | -- | -- | -- | -- |
| 491.93 | 1.04 | 7.05 | 4.51 | 2.03 | -- | -- | -- | 1.94 | 0.185 | -- | -- | -- | -- |
| 446.42 | 0.984 | 7.34 | 2.11 | -- | 3.14 | -- | -- | 0.398 | -- | 21.6 | 5993 | 6.62 | -- |
| 230.66 | 0.707 | 7.41 | -- | 2.13 | 4.35 | -- | -- | 0.371 | 0.488 | 19.6 | 28256 | 0.212 | -- |
| 751.14 | 1.28 | 7.01 | 4.58 | -- | -- | -- | -- | 1.97 | -- | -- | -- | -- | -- |
| 1028.79 | 1.5 | 7.16 | -- | 2.09 | -- | -- | -- | 1.43 | 0.303 | -- | -- | -- | -- |
| 459.4 | 0.998 | 7.41 | -- | -- | 4.31 | -- | -- | 0.103 | -- | 20.5 | 26346 | 6.23 | -- |
| 1304.23 | 1.69 | 7.12 | -- | -- | -- | -- | -- | 1.46 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 222.95 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 11 | 223.19 | temperature | 20 | 14400 | < th | dose dependent | rect. | 21 | 9 |
| 13 | 223.34 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 18 | 223.74 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 21 | 223.82 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 23 | 223.83 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 4 |
| 30 | 224.03 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 31 | 224.08 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 35 | 224.15 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 10 |
| 80 | 225.48 | temperature | 20 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 82 | 225.53 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 7 |
| 100 | 225.83 | temperature | 20 | 14400 | < th | dose dependent | sin | 10 | NA |
| 176 | 226.76 | temperature | 20 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 189 | 226.91 | temperature | 15 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 192 | 226.96 | temperature | 20 | 43200 | < th | dose independent | sin | 13 | NA |
| 193 | 226.96 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 204 | 227.08 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 207 | 227.10 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 209 | 227.11 | temperature | 20 | 43200 | > th | dose independent | sin | 13 | NA |
| 216 | 227.15 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 219 | 227.17 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 222 | 227.19 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 234 | 227.26 | temperature | 20 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 248 | 227.34 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 260 | 227.42 | radiation | 1 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 455 | 228.32 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 613 | 228.88 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 7 |
| 718 | 229.27 | temperature | 20 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 722 | 229.28 | temperature | 20 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 732 | 229.29 | temperature | 15 | 14400 | > th | dose dependent | rect. | 23 | 5 |
| 735 | 229.31 | temperature | 20 | 4320 | > th | dose dependent | rect. | 22 | 10 |
| 757 | 229.37 | temperature | 15 | 14400 | > th | dose dependent | rect. | 23 | 7 |
| 776 | 229.42 | temperature | 20 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 838 | 229.62 | temperature | 15 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 849 | 229.64 | temperature | 20 | 43200 | < th | dose independent | rect. | 5 | 23 |
| 867 | 229.71 | temperature | 20 | 43200 | > th | dose independent | rect. | 5 | 23 |
| 885 | 229.76 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 890 | 229.77 | temperature | 20 | 14400 | > th | dose dependent | rect. | 18 | 6 |
| 903 | 229.81 | temperature | 20 | 43200 | < th | dose independent | no | NA | NA |
| 909 | 229.83 | temperature | 20 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 927 | 229.89 | temperature | 20 | 43200 | > th | dose independent | no | NA | NA |
| 935 | 229.92 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |