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Os07g0131600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Monosaccharide transporter.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.0272) R2 : 0.97
β1 : 1.79 (0.1) R2dD : 0.023 R2D : -0.196
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.75 (0.117) R2dE : 0.0169 R2E : -0.293
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -6.74 (0.0586) R2dN8 : 1.19 R2N8 : 0.934
σ : 0.508
deviance : 119.17
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_____
C
peak time of C : --
E
wheather : wind
threshold : 1.199
memory length : 232
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 3.87
open length of G : 0.733

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
116.45 0.507 12.5 1.97 0.188 -2.13 -0.712 3.33 -6.72 19.7 0.954 221 3.91 1.2
115.22 0.5 12.5 1.9 0.172 -1.83 -0.949 -- -6.71 19.4 1.129 229 3.87 0.703
116.93 0.504 12.5 1.99 0.238 -2 -- 3.39 -6.73 17.8 0.9997 221 3.92 1.21
116.76 0.503 12.5 1.83 0.225 -1.71 -- -- -6.72 17.8 1.197 229 3.87 0.733
119.74 0.51 12.5 2.07 -- -2.22 -- 3.85 -6.71 -- 0.9 220 3.9 1.22
160.62 0.594 12.5 1.72 0.672 -- 0.445 -- -6.59 17.5 -- -- -- --
161.04 0.594 12.5 1.72 0.676 -- -- -- -6.59 17.7 -- -- -- --
119.17 0.508 12.5 1.79 -- -1.75 -- -- -6.74 -- 1.199 232 3.87 0.733
205.31 0.667 12.5 -- 0.27 -1.42 -- -- -6.78 17.4 0.9837 249 3.75 0.833
184.76 0.635 12.5 1.69 -- -- -- -- -6.61 -- -- -- -- --
238.66 0.723 12.5 -- 0.649 -- -- -- -6.78 17.8 -- -- -- --
206.96 0.67 12.5 -- -- -1.53 -- -- -6.8 -- 0.9 248 3.82 0.725
260.51 0.753 12.5 -- -- -- -- -- -6.79 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 118.05 wind 1.0 270 < th dose independent rect. 4 1
2 119.48 wind 1.0 270 < th dose dependent rect. 4 1
3 122.48 wind 1.0 90 < th dose dependent rect. 4 4
4 122.75 wind 1.0 90 < th dose dependent rect. 4 6
11 124.59 wind 1.0 90 < th dose independent rect. 3 5
12 124.73 wind 1.0 90 < th dose independent rect. 3 8
16 124.96 temperature 25.0 30 < th dose independent rect. 3 9
39 126.17 humidity 80.0 720 < th dose dependent rect. 20 1
41 126.32 temperature 25.0 720 > th dose dependent rect. 21 1
56 127.38 humidity 90.0 90 > th dose dependent rect. 3 4
61 127.61 temperature 20.0 30 > th dose dependent rect. 4 3
72 128.05 humidity 90.0 90 > th dose dependent rect. 4 1
79 128.52 temperature 25.0 90 < th dose independent rect. 1 10
86 128.79 temperature 25.0 30 < th dose independent rect. 3 7
90 128.99 humidity 80.0 720 > th dose independent rect. 21 1
105 129.69 temperature 25.0 30 < th dose independent sin 5 NA
115 130.00 wind 1.0 90 < th dose dependent sin 5 NA
118 130.10 temperature 20.0 90 > th dose dependent rect. 4 1
119 130.12 humidity 90.0 90 > th dose independent rect. 3 4
128 130.20 temperature 30.0 4320 > th dose dependent rect. 18 1
142 130.23 temperature 25.0 30 < th dose independent rect. 3 5
164 130.35 wind 1.0 90 > th dose independent sin 4 NA
172 130.43 humidity 50.0 1440 < th dose independent rect. 16 1
190 130.49 humidity 50.0 1440 < th dose dependent rect. 16 1
206 131.08 humidity 90.0 10 > th dose independent rect. 4 2
214 131.26 wind 9.0 10 < th dose independent rect. 16 14
247 131.82 temperature 20.0 10 > th dose dependent rect. 2 5
259 131.91 humidity 80.0 1440 < th dose dependent rect. 18 17
260 131.94 temperature 25.0 90 < th dose independent rect. 3 3
273 132.18 radiation 30.0 10 < th dose independent rect. 16 14
284 132.25 temperature 10.0 10 > th dose independent rect. 6 10
286 132.25 atmosphere 1015.0 10 < th dose independent rect. 6 10
287 132.25 temperature 10.0 10 > th dose independent rect. 16 14
296 132.36 precipitation 0.1 10 < th dose independent rect. 6 10
298 132.36 precipitation 0.1 10 < th dose dependent rect. 6 10
299 132.37 precipitation 0.1 10 < th dose independent rect. 16 14
300 132.37 precipitation 0.1 10 < th dose dependent rect. 16 14
302 132.40 humidity 80.0 720 < th dose independent rect. 20 1
304 132.40 humidity 70.0 1440 > th dose independent rect. 18 18
311 132.50 atmosphere 995.0 10 > th dose independent rect. 6 10
345 132.80 wind 9.0 10 < th dose independent rect. 6 10
348 132.85 humidity 80.0 1440 < th dose dependent sin 9 NA
349 132.86 temperature 25.0 90 < th dose independent rect. 4 1
352 132.87 temperature 25.0 10 > th dose independent rect. 4 3
356 132.92 wind 1.0 90 < th dose independent sin 5 NA
357 132.92 atmosphere 995.0 10 > th dose independent rect. 16 14
362 132.95 humidity 90.0 90 > th dose independent rect. 4 1
371 133.04 wind 1.0 30 > th dose independent rect. 6 10
402 133.49 temperature 10.0 1440 > th dose independent rect. 7 10
405 133.49 temperature 10.0 1440 > th dose independent rect. 17 14
408 133.49 radiation 40.0 1440 < th dose independent rect. 17 14
413 133.50 temperature 25.0 30 > th dose independent rect. 4 12
426 133.65 wind 7.0 1440 < th dose independent rect. 5 1
428 133.65 temperature 10.0 1440 > th dose independent rect. 5 1
431 133.65 temperature 30.0 1440 < th dose independent rect. 5 1
435 133.65 humidity 50.0 1440 > th dose independent rect. 5 1
444 133.65 atmosphere 995.0 1440 > th dose independent rect. 5 1
445 133.65 atmosphere 1015.0 1440 < th dose independent rect. 5 1
446 133.65 radiation 20.0 1440 < th dose independent rect. 5 1
455 133.65 temperature 10.0 1440 > th dose independent rect. 6 23
458 133.66 temperature 25.0 30 > th dose independent sin 5 NA
467 133.77 humidity 70.0 1440 < th dose independent rect. 17 19
468 133.78 wind 1.0 720 > th dose independent rect. 4 1
470 133.80 humidity 50.0 10 > th dose independent rect. 16 14
484 133.92 temperature 25.0 270 < th dose independent rect. 1 4
492 133.99 humidity 70.0 720 > th dose independent rect. 19 8
519 134.14 temperature 25.0 270 < th dose independent rect. 1 1
534 134.29 temperature 25.0 30 > th dose independent rect. 2 14
536 134.30 temperature 25.0 270 > th dose independent rect. 24 8
542 134.33 temperature 25.0 30 > th dose independent rect. 4 10
543 134.33 temperature 10.0 10 > th dose dependent rect. 6 10
546 134.37 temperature 25.0 10 > th dose independent rect. 1 8
549 134.41 humidity 70.0 1440 > th dose independent sin 9 NA
569 134.53 temperature 20.0 90 > th dose independent rect. 4 1
662 135.07 radiation 1.0 10 > th dose independent rect. 16 14
663 135.08 humidity 70.0 720 < th dose independent rect. 19 13
667 135.10 temperature 25.0 270 > th dose independent rect. 1 6
669 135.11 humidity 70.0 1440 < th dose independent sin 10 NA
713 135.40 humidity 50.0 1440 > th dose independent rect. 16 1
716 135.42 wind 1.0 30 > th dose independent rect. 17 23
718 135.44 wind 1.0 90 > th dose independent rect. 4 11
719 135.44 humidity 70.0 4320 < th dose independent rect. 19 13
745 135.61 humidity 70.0 1440 > th dose independent rect. 9 3
783 135.77 temperature 30.0 720 > th dose independent rect. 18 1
883 136.17 radiation 1.0 1440 > th dose dependent rect. 17 15
884 136.17 radiation 30.0 1440 < th dose dependent rect. 17 15
890 136.19 humidity 80.0 1440 < th dose dependent no NA NA
891 136.19 wind 5.0 43200 < th dose dependent rect. 23 8
895 136.20 radiation 10.0 270 > th dose independent rect. 16 1
898 136.20 humidity 80.0 1440 < th dose dependent rect. 5 23
902 136.21 humidity 80.0 1440 < th dose dependent rect. 23 23
906 136.22 humidity 80.0 1440 < th dose dependent rect. 1 23
962 136.31 humidity 80.0 1440 < th dose dependent rect. 9 23
967 136.32 humidity 70.0 4320 < th dose dependent rect. 19 12
974 136.33 humidity 70.0 4320 < th dose independent rect. 19 2
985 136.33 radiation 20.0 1440 < th dose independent rect. 16 16
995 136.35 temperature 30.0 30 < th dose independent rect. 16 14