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Os07g0131200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0252) R2 : 0.849
β1 : 1.93 (0.0922) R2dD : 0.15 R2D : 0.092
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -2.22 (0.0538) R2dN8 : 0.757 R2N8 : 0.699
σ : 0.473
deviance : 102.27
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
87.23 0.439 11.2 2.74 0.0787 -1.04 -0.794 5.59 -2.04 21.9 26 624 -- --
91.89 0.446 11.3 1.99 0.204 -0.591 -0.25 -- -2.13 0.349 25.71 886 -- --
89.35 0.44 11.2 2.66 0.0972 -0.931 -- 4.75 -2.06 0.218 25.94 611 -- --
90.16 0.442 11.3 2.04 0.288 -0.496 -- -- -2.22 3.89 25.9 1008 -- --
89.68 0.441 11.2 2.62 -- -0.937 -- 4.72 -2.07 -- 25.96 566 -- --
97.63 0.463 11.3 1.92 0.299 -- -0.0456 -- -2.23 5.49 -- -- -- --
97.63 0.463 11.3 1.92 0.299 -- -- -- -2.23 5.57 -- -- -- --
92.94 0.449 11.3 2.08 -- -0.542 -- -- -2.19 -- 25.7 1984 -- --
194.2 0.649 11.3 -- 0.337 -0.112 -- -- -2.47 5.36 30 1223 -- --
102.27 0.473 11.3 1.93 -- -- -- -- -2.22 -- -- -- -- --
194.74 0.653 11.3 -- 0.331 -- -- -- -2.45 5.32 -- -- -- --
139.9 0.551 11.4 -- -- 1.22 -- -- -2.82 -- 14.6 47520 -- --
200.45 0.661 11.3 -- -- -- -- -- -2.44 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 81.04 atmosphere 1005 270 > th dose dependent rect. 24 7
4 82.26 atmosphere 1005 30 > th dose dependent rect. 24 9
24 84.62 temperature 25 720 > th dose dependent rect. 20 1
30 84.81 humidity 70 720 > th dose independent rect. 18 18
36 85.14 temperature 25 720 > th dose dependent rect. 5 10
39 85.16 radiation 10 43200 < th dose dependent rect. 23 1
41 85.17 humidity 70 4320 < th dose independent rect. 19 12
43 85.18 wind 1 43200 > th dose independent rect. 8 2
56 85.29 humidity 70 4320 < th dose independent rect. 19 2
70 85.35 humidity 70 720 > th dose independent rect. 19 1
76 85.40 humidity 70 4320 < th dose dependent rect. 19 12
79 85.42 humidity 60 14400 < th dose dependent rect. 17 16
80 85.44 humidity 60 14400 < th dose dependent rect. 17 3
93 85.46 humidity 70 4320 < th dose dependent rect. 19 2
106 85.49 temperature 25 720 > th dose dependent rect. 11 2
107 85.49 temperature 25 720 > th dose dependent rect. 22 17
112 85.55 radiation 1 43200 < th dose dependent rect. 19 6
135 85.66 temperature 25 720 > th dose dependent sin 4 NA
139 85.71 humidity 80 43200 > th dose independent rect. 23 1
140 85.71 radiation 1 43200 < th dose dependent rect. 19 8
144 85.77 humidity 70 1440 < th dose independent rect. 17 18
147 85.79 temperature 25 10 > th dose independent rect. 1 8
157 85.86 radiation 1 43200 < th dose dependent rect. 21 4
162 85.88 humidity 70 4320 > th dose independent rect. 19 4
164 85.90 humidity 60 14400 < th dose independent rect. 17 3
167 85.91 wind 1 43200 < th dose independent rect. 8 2
182 85.93 humidity 70 4320 > th dose independent rect. 19 12
187 85.95 temperature 25 10 > th dose independent rect. 1 6
203 85.99 humidity 90 10 < th dose independent rect. 2 5
205 86.00 humidity 70 1440 > th dose independent sin 10 NA
209 86.02 temperature 25 10 > th dose independent rect. 3 6
211 86.02 humidity 70 4320 > th dose independent rect. 19 9
227 86.10 humidity 70 720 > th dose independent rect. 10 1
229 86.12 humidity 90 10 < th dose independent rect. 4 3
248 86.23 wind 5 43200 < th dose dependent rect. 2 13
268 86.25 wind 7 43200 < th dose dependent rect. 24 16
269 86.26 humidity 80 43200 < th dose independent rect. 22 1
272 86.26 atmosphere 1005 30 > th dose dependent rect. 24 11
300 86.31 humidity 50 14400 > th dose independent rect. 17 16
302 86.31 wind 5 43200 < th dose dependent sin 4 NA
310 86.33 humidity 50 14400 < th dose dependent rect. 16 19
312 86.34 wind 1 43200 < th dose dependent rect. 8 2
329 86.38 humidity 60 14400 > th dose independent rect. 18 14
331 86.38 wind 3 43200 < th dose dependent rect. 2 9
366 86.47 wind 1 43200 > th dose dependent rect. 24 16
372 86.48 wind 1 43200 > th dose dependent rect. 2 14
417 86.57 radiation 40 720 > th dose independent rect. 11 2
431 86.60 wind 5 43200 < th dose dependent rect. 9 1
434 86.61 humidity 70 720 > th dose independent rect. 19 8
443 86.62 wind 1 43200 > th dose dependent sin 4 NA
467 86.67 wind 3 43200 > th dose independent rect. 3 12
493 86.71 humidity 50 14400 > th dose independent rect. 16 18
534 86.77 humidity 70 1440 < th dose independent sin 10 NA
535 86.77 wind 3 43200 < th dose independent rect. 2 12
542 86.78 wind 3 43200 > th dose independent sin 4 NA
567 86.80 wind 1 43200 > th dose dependent rect. 20 20
569 86.81 wind 3 43200 < th dose independent rect. 2 9
583 86.82 humidity 80 43200 < th dose dependent rect. 24 4
584 86.82 atmosphere 1000 43200 < th dose dependent rect. 23 6
590 86.83 atmosphere 1000 43200 < th dose dependent rect. 2 1
593 86.83 atmosphere 1000 43200 < th dose dependent rect. 1 4
600 86.83 wind 7 43200 < th dose dependent rect. 17 18
605 86.84 atmosphere 1000 43200 < th dose dependent rect. 4 1
644 86.86 humidity 80 43200 < th dose dependent rect. 22 8
651 86.87 atmosphere 1000 43200 < th dose dependent rect. 23 1
683 86.89 wind 3 43200 > th dose independent rect. 2 9
696 86.89 wind 1 43200 > th dose dependent rect. 17 18
705 86.90 wind 9 43200 > th dose dependent rect. 20 1
726 86.91 wind 1 43200 > th dose dependent rect. 18 16
735 86.92 wind 3 43200 < th dose independent sin 4 NA
736 86.92 humidity 70 1440 > th dose independent rect. 5 6
739 86.92 temperature 25 1440 > th dose dependent rect. 7 3
785 86.94 humidity 70 1440 > th dose independent rect. 7 4
787 86.94 humidity 70 1440 > th dose independent rect. 3 8
789 86.94 humidity 70 1440 > th dose independent rect. 24 11
794 86.94 wind 5 43200 < th dose dependent rect. 6 5
826 86.96 humidity 80 43200 < th dose independent rect. 22 10
831 86.96 wind 7 43200 < th dose dependent sin 10 NA
832 86.96 wind 3 43200 > th dose dependent rect. 6 1
881 86.99 humidity 50 14400 < th dose independent rect. 16 19
895 87.00 humidity 80 43200 < th dose dependent rect. 22 10
910 87.01 wind 1 43200 > th dose dependent sin 10 NA
918 87.01 radiation 10 14400 > th dose dependent rect. 17 13
926 87.02 wind 5 43200 > th dose independent rect. 6 1
940 87.03 humidity 70 1440 < th dose independent rect. 10 1
970 87.04 wind 3 43200 < th dose independent rect. 3 4
976 87.05 wind 3 43200 > th dose independent rect. 3 4
989 87.06 wind 9 43200 > th dose independent rect. 20 1
990 87.06 wind 5 43200 < th dose independent rect. 6 1