Os07g0131000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Concanavalin A-like lectin/glucanase domain containing protein.
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Os07g0131000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Concanavalin A-like lectin/glucanase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 156.22 | 0.587 | 7.53 | 1.08 | 0.616 | 1.12 | -0.0438 | -0.759 | 0.294 | 8.38 | 69 | 1245 | -- | -- |
| 157.25 | 0.584 | 7.52 | 1.17 | 0.641 | 1.08 | 0.029 | -- | 0.318 | 8.44 | 68.13 | 1220 | -- | -- |
| 156.18 | 0.582 | 7.53 | 1.08 | 0.623 | 1.12 | -- | -0.747 | 0.296 | 8.39 | 69 | 1236 | -- | -- |
| 157.25 | 0.584 | 7.52 | 1.17 | 0.641 | 1.08 | -- | -- | 0.318 | 8.45 | 68.14 | 1220 | -- | -- |
| 176.21 | 0.618 | 7.55 | 1.09 | -- | 1.05 | -- | -0.761 | 0.297 | -- | 68.77 | 1278 | -- | -- |
| 199.43 | 0.662 | 7.52 | 1.39 | 0.586 | -- | 0.279 | -- | 0.32 | 6.72 | -- | -- | -- | -- |
| 199.6 | 0.662 | 7.52 | 1.39 | 0.586 | -- | -- | -- | 0.319 | 6.84 | -- | -- | -- | -- |
| 177.41 | 0.62 | 7.54 | 1.18 | -- | 1 | -- | -- | 0.321 | -- | 68.76 | 1278 | -- | -- |
| 192.01 | 0.645 | 7.55 | -- | 0.656 | 1.25 | -- | -- | 0.191 | 8.52 | 68.64 | 1225 | -- | -- |
| 217.61 | 0.689 | 7.53 | 1.4 | -- | -- | -- | -- | 0.331 | -- | -- | -- | -- | -- |
| 250.6 | 0.741 | 7.56 | -- | 0.603 | -- | -- | -- | 0.165 | 6.7 | -- | -- | -- | -- |
| 213.18 | 0.68 | 7.56 | -- | -- | 1.17 | -- | -- | 0.192 | -- | 68.63 | 1283 | -- | -- |
| 269.59 | 0.766 | 7.57 | -- | -- | -- | -- | -- | 0.175 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 159.78 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 2 | 159.78 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 3 | 161.60 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 6 | 161.90 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 9 | 162.09 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 4 |
| 25 | 162.47 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 34 | 162.83 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 48 | 163.10 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 18 | 21 |
| 52 | 163.18 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 53 | 163.27 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 56 | 163.36 | humidity | 80.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 67 | 163.63 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 73 | 163.79 | humidity | 90.0 | 720 | < th | dose independent | rect. | 19 | 4 |
| 74 | 163.80 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 85 | 163.99 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 92 | 164.08 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 109 | 164.22 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 14 |
| 116 | 164.38 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 3 | 14 |
| 159 | 164.80 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 23 | 18 |
| 182 | 164.95 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 184 | 164.96 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 10 |
| 186 | 164.97 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 4 | NA |
| 195 | 165.01 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 197 | 165.01 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 250 | 165.26 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 271 | 165.38 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 280 | 165.43 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 3 | 20 |
| 290 | 165.47 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 5 |
| 328 | 165.64 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 8 |
| 375 | 165.83 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 13 |
| 379 | 165.84 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 452 | 166.07 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 21 | 21 |
| 474 | 166.15 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 499 | 166.23 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 522 | 166.28 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 556 | 166.32 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 621 | 166.47 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 679 | 166.63 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 686 | 166.65 | humidity | 50.0 | 1440 | > th | dose dependent | no | NA | NA |
| 687 | 166.65 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 698 | 166.67 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 709 | 166.70 | humidity | 80.0 | 1440 | < th | dose dependent | no | NA | NA |
| 714 | 166.71 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 750 | 166.76 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 751 | 166.77 | humidity | 70.0 | 1440 | < th | dose independent | no | NA | NA |
| 842 | 166.79 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 20 |
| 851 | 166.80 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 855 | 166.82 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 22 | 21 |
| 863 | 166.83 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 24 | 19 |
| 866 | 166.83 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 869 | 166.84 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 5 | 22 |
| 879 | 166.85 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 886 | 166.85 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 887 | 166.85 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 892 | 166.86 | radiation | 1.0 | 1440 | < th | dose independent | no | NA | NA |
| 909 | 166.88 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 5 | 20 |
| 910 | 166.88 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 2 | 21 |
| 915 | 166.89 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 929 | 166.90 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 935 | 166.90 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 954 | 166.92 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 22 | 19 |
| 967 | 166.94 | humidity | 50.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 977 | 166.95 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 17 |
| 990 | 166.98 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 5 | 14 |