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Os07g0124500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) (eIF3c).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.3 (0.0185) R2 : 0.618
β1 : 1.29 (0.0677) R2dD : 0.314 R2D : 0.249
β2 : 0.939 (0.0476) R2dC : 0.326 R2C : 0.294
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.273 (0.0395) R2dN8 : 0.0539 R2N8 : -0.00868
σ : 0.348
deviance : 55.11
__
_____
C
peak time of C : 16.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
47.56 0.324 13.3 1.36 1.02 0.507 0.562 -1.21 0.367 16.9 92 577 -- --
49.44 0.327 13.3 1.25 1.07 0.547 0.89 -- 0.348 17.2 89.66 647 -- --
48.2 0.323 13.3 1.37 1.03 0.507 -- -1.56 0.374 16.9 92.39 518 -- --
51.3 0.334 13.3 1.24 1.05 0.503 -- -- 0.356 17.1 89.46 643 -- --
82.73 0.426 13.3 1.3 -- -0.527 -- -0.418 0.202 -- 72.66 1262 -- --
54.01 0.345 13.3 1.28 0.935 -- 0.649 -- 0.27 16.7 -- -- -- --
55.11 0.348 13.3 1.29 0.939 -- -- -- 0.273 16.6 -- -- -- --
82.49 0.425 13.3 1.27 -- -0.56 -- -- 0.205 -- 69.5 1239 -- --
90.55 0.443 13.3 -- 0.903 0.694 -- -- 0.258 16.7 85.66 1418 -- --
102.03 0.472 13.3 1.25 -- -- -- -- 0.249 -- -- -- -- --
98.7 0.465 13.4 -- 0.915 -- -- -- 0.13 16.6 -- -- -- --
125.1 0.523 13.4 -- -- -0.54 -- -- 0.0656 -- 69.5 1239 -- --
143.25 0.559 13.3 -- -- -- -- -- 0.11 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 45.40 temperature 15.0 270 > th dose independent rect. 10 22
2 45.59 temperature 15.0 270 > th dose independent rect. 13 17
3 45.62 wind 5.0 90 < th dose independent rect. 3 5
4 45.63 wind 5.0 270 < th dose independent rect. 23 8
5 45.64 atmosphere 1005.0 90 > th dose independent rect. 3 5
7 45.71 temperature 15.0 90 > th dose independent rect. 15 17
9 45.72 temperature 15.0 90 > th dose independent rect. 13 19
10 45.73 radiation 40.0 90 < th dose independent rect. 3 16
12 45.81 radiation 40.0 90 < th dose independent rect. 13 19
13 45.81 temperature 10.0 90 > th dose dependent rect. 3 5
14 45.84 atmosphere 1005.0 10 > th dose independent rect. 3 6
16 45.87 wind 5.0 270 < th dose independent rect. 3 2
18 45.92 radiation 10.0 1440 > th dose independent rect. 11 4
21 45.94 atmosphere 1005.0 270 > th dose independent rect. 3 2
27 46.00 radiation 1.0 270 > th dose dependent rect. 8 2
30 46.03 humidity 90.0 720 > th dose dependent rect. 22 3
33 46.05 humidity 90.0 720 > th dose dependent rect. 23 1
34 46.07 temperature 15.0 10 > th dose independent rect. 15 18
35 46.09 precipitation 0.1 90 < th dose independent rect. 3 5
37 46.09 precipitation 0.1 90 < th dose dependent rect. 3 5
41 46.14 atmosphere 1000.0 90 > th dose dependent rect. 2 6
43 46.16 wind 5.0 10 < th dose independent rect. 3 6
53 46.23 temperature 10.0 10 > th dose dependent rect. 3 6
56 46.24 temperature 10.0 90 > th dose dependent rect. 13 19
60 46.26 humidity 90.0 720 > th dose dependent rect. 8 18
62 46.27 temperature 10.0 90 > th dose independent rect. 3 5
64 46.27 temperature 30.0 90 < th dose independent rect. 3 5
65 46.27 humidity 50.0 90 > th dose independent rect. 3 5
67 46.27 atmosphere 995.0 90 > th dose independent rect. 3 5
68 46.27 atmosphere 1015.0 90 < th dose independent rect. 3 5
69 46.27 temperature 10.0 90 > th dose independent rect. 8 19
70 46.28 atmosphere 1000.0 10 > th dose dependent rect. 3 5
72 46.29 radiation 40.0 90 < th dose independent rect. 3 5
73 46.29 precipitation 0.1 10 < th dose independent rect. 3 6
75 46.29 precipitation 0.1 10 < th dose dependent rect. 3 6
76 46.30 wind 1.0 270 > th dose independent rect. 3 1
77 46.30 radiation 20.0 90 < th dose independent rect. 3 6
80 46.31 wind 9.0 90 < th dose independent rect. 8 19
81 46.31 atmosphere 1000.0 270 > th dose dependent rect. 2 3
88 46.33 wind 9.0 90 < th dose dependent rect. 3 5
90 46.34 wind 9.0 10 < th dose dependent rect. 3 6
94 46.36 precipitation 0.1 270 < th dose independent rect. 3 2
97 46.36 temperature 10.0 270 > th dose dependent rect. 3 2
98 46.36 precipitation 0.1 270 < th dose dependent rect. 3 2
99 46.37 temperature 15.0 270 > th dose independent rect. 11 9
107 46.41 radiation 10.0 270 < th dose independent rect. 1 7
118 46.44 atmosphere 1010.0 270 < th dose independent rect. 11 9
119 46.44 precipitation 0.1 90 < th dose independent rect. 8 19
121 46.44 precipitation 0.1 90 < th dose dependent rect. 8 19
127 46.46 temperature 10.0 10 > th dose dependent rect. 15 18
138 46.48 radiation 40.0 90 < th dose dependent rect. 3 16
145 46.51 wind 9.0 270 < th dose independent rect. 5 22
151 46.53 wind 1.0 90 > th dose independent rect. 8 7
152 46.54 precipitation 0.1 270 < th dose independent rect. 13 17
153 46.54 precipitation 0.1 270 < th dose dependent rect. 13 17
154 46.55 radiation 20.0 90 < th dose independent rect. 3 16
163 46.57 atmosphere 1015.0 1440 < th dose independent rect. 3 7
167 46.58 wind 1.0 90 > th dose independent rect. 8 5
172 46.59 radiation 20.0 90 < th dose independent rect. 3 8
175 46.59 atmosphere 995.0 90 > th dose independent rect. 8 19
179 46.59 temperature 10.0 10 > th dose dependent rect. 13 20
188 46.61 temperature 10.0 10 > th dose independent rect. 3 6
190 46.61 temperature 30.0 10 < th dose independent rect. 3 6
191 46.61 humidity 50.0 10 > th dose independent rect. 3 6
193 46.61 atmosphere 995.0 10 > th dose independent rect. 3 6
194 46.61 atmosphere 1015.0 10 < th dose independent rect. 3 6
196 46.61 temperature 10.0 10 > th dose independent rect. 9 18
216 46.66 temperature 10.0 270 > th dose independent rect. 3 2
218 46.66 temperature 30.0 270 < th dose independent rect. 3 2
219 46.66 humidity 50.0 270 > th dose independent rect. 3 2
222 46.66 atmosphere 995.0 270 > th dose independent rect. 3 2
223 46.66 atmosphere 1010.0 270 < th dose independent rect. 3 2
225 46.66 radiation 20.0 270 < th dose independent rect. 3 2
229 46.66 temperature 10.0 270 > th dose independent rect. 5 22
230 46.66 radiation 20.0 270 < th dose dependent rect. 3 2
234 46.66 radiation 1.0 270 < th dose dependent rect. 5 21
235 46.67 radiation 1.0 270 < th dose independent rect. 3 2
239 46.67 wind 9.0 10 < th dose independent rect. 9 18
243 46.67 humidity 50.0 90 > th dose dependent rect. 19 8
244 46.68 precipitation 0.1 90 < th dose independent rect. 8 7
246 46.68 precipitation 0.1 10 < th dose independent rect. 9 18
251 46.68 precipitation 0.1 90 < th dose dependent rect. 8 7
252 46.68 radiation 20.0 270 < th dose dependent rect. 1 8
253 46.68 precipitation 0.1 10 < th dose dependent rect. 9 18
254 46.69 precipitation 0.1 270 < th dose independent rect. 10 22
256 46.69 precipitation 0.1 270 < th dose dependent rect. 10 22
258 46.70 temperature 10.0 270 > th dose independent rect. 6 7
259 46.70 atmosphere 995.0 270 > th dose independent rect. 6 7
261 46.70 atmosphere 1015.0 270 < th dose independent rect. 6 7
280 46.71 temperature 10.0 90 > th dose independent rect. 8 7
281 46.71 atmosphere 1015.0 90 < th dose independent rect. 8 7
291 46.72 radiation 40.0 10 < th dose independent rect. 3 6
292 46.72 precipitation 0.1 270 < th dose independent rect. 6 7
293 46.72 wind 9.0 270 < th dose dependent rect. 3 2
296 46.72 precipitation 0.1 270 < th dose dependent rect. 6 7
298 46.73 radiation 40.0 10 < th dose independent rect. 12 21
307 46.75 wind 9.0 270 < th dose independent rect. 6 7
310 46.75 radiation 40.0 90 < th dose dependent rect. 3 8
313 46.76 temperature 10.0 90 > th dose independent rect. 8 5
314 46.76 atmosphere 995.0 90 > th dose independent rect. 8 5
315 46.76 atmosphere 1015.0 90 < th dose independent rect. 8 5
318 46.76 atmosphere 995.0 90 > th dose independent rect. 8 7
323 46.76 radiation 40.0 90 < th dose dependent rect. 3 6
325 46.77 precipitation 0.1 90 < th dose independent rect. 8 5
329 46.77 precipitation 0.1 90 < th dose dependent rect. 8 5
332 46.78 atmosphere 1015.0 90 < th dose independent rect. 13 19
352 46.81 radiation 1.0 90 > th dose independent rect. 8 5
380 46.85 humidity 50.0 270 > th dose independent rect. 9 1
385 46.85 radiation 40.0 90 < th dose dependent rect. 13 19
386 46.86 wind 1.0 270 > th dose independent rect. 8 2
389 46.86 humidity 50.0 270 > th dose independent rect. 20 15
396 46.87 temperature 10.0 270 > th dose independent rect. 20 15
397 46.87 atmosphere 995.0 270 > th dose independent rect. 20 15
398 46.87 atmosphere 995.0 10 > th dose independent rect. 9 18
399 46.87 radiation 40.0 270 < th dose dependent sin 8 NA
401 46.88 temperature 10.0 270 > th dose independent rect. 9 1
402 46.88 atmosphere 995.0 270 > th dose independent rect. 9 1
403 46.88 atmosphere 1015.0 270 < th dose independent rect. 9 1
407 46.88 radiation 1.0 90 > th dose independent rect. 8 7
408 46.88 atmosphere 1015.0 90 < th dose independent rect. 15 17
414 46.89 precipitation 0.1 270 < th dose independent rect. 8 2
419 46.89 atmosphere 1000.0 90 > th dose independent rect. 19 8
421 46.89 temperature 15.0 90 > th dose independent rect. 3 16
423 46.89 precipitation 0.1 90 < th dose independent rect. 15 17
426 46.89 precipitation 0.1 270 < th dose dependent rect. 8 2
431 46.89 precipitation 0.1 90 < th dose dependent rect. 15 17
435 46.90 wind 9.0 270 < th dose independent rect. 8 2
446 46.90 precipitation 0.1 270 < th dose independent rect. 11 9
448 46.90 humidity 80.0 1440 > th dose dependent rect. 11 4
450 46.90 precipitation 0.1 270 < th dose dependent rect. 11 9
462 46.91 wind 9.0 90 < th dose independent rect. 15 17
477 46.92 precipitation 0.1 90 < th dose independent rect. 13 19
482 46.92 precipitation 0.1 90 < th dose dependent rect. 13 19
487 46.93 wind 9.0 90 < th dose independent rect. 8 7
491 46.93 wind 9.0 270 < th dose independent rect. 13 17
500 46.94 humidity 50.0 270 > th dose independent rect. 6 7
506 46.95 humidity 90.0 10 < th dose independent rect. 2 6
530 46.98 wind 9.0 90 < th dose independent rect. 8 5
533 46.98 precipitation 0.1 10 < th dose independent rect. 15 18
536 46.98 precipitation 0.1 10 < th dose dependent rect. 15 18
537 46.98 radiation 40.0 10 < th dose dependent rect. 13 20
550 47.00 humidity 90.0 720 > th dose independent rect. 23 1
552 47.00 humidity 50.0 90 > th dose independent rect. 8 5
555 47.00 radiation 1.0 10 > th dose independent rect. 9 6
559 47.00 wind 9.0 90 < th dose independent rect. 13 19
571 47.01 humidity 90.0 720 > th dose dependent sin 16 NA
576 47.02 wind 9.0 270 < th dose independent rect. 20 15
603 47.04 atmosphere 995.0 90 > th dose dependent rect. 8 19
606 47.05 temperature 10.0 10 > th dose independent rect. 8 7
608 47.05 atmosphere 995.0 10 > th dose independent rect. 8 7
609 47.05 atmosphere 1015.0 10 < th dose independent rect. 8 7
610 47.05 precipitation 0.1 10 < th dose independent rect. 8 7
615 47.05 precipitation 0.1 10 < th dose dependent rect. 8 7
647 47.08 atmosphere 1015.0 10 < th dose independent rect. 15 18
657 47.09 radiation 40.0 270 < th dose dependent rect. 1 15
669 47.10 precipitation 0.1 270 < th dose independent rect. 11 20
677 47.10 precipitation 0.1 270 < th dose dependent rect. 11 20
689 47.11 radiation 1.0 270 > th dose dependent sin 9 NA
697 47.12 humidity 90.0 720 > th dose independent rect. 21 4
706 47.12 humidity 50.0 90 > th dose independent rect. 8 19
719 47.13 humidity 90.0 10 < th dose independent rect. 13 20
743 47.14 wind 9.0 90 < th dose dependent rect. 15 17
765 47.16 temperature 10.0 1440 > th dose independent rect. 9 7
768 47.16 temperature 10.0 1440 > th dose independent rect. 16 17
786 47.17 atmosphere 995.0 90 > th dose independent rect. 15 17
789 47.17 radiation 40.0 10 < th dose independent rect. 15 17
800 47.17 atmosphere 995.0 10 > th dose dependent rect. 9 18
833 47.20 radiation 20.0 1440 < th dose dependent rect. 12 3
835 47.20 radiation 20.0 270 < th dose dependent rect. 1 12
841 47.21 radiation 10.0 10 < th dose independent rect. 3 17
842 47.21 atmosphere 995.0 90 > th dose independent rect. 13 19
869 47.22 temperature 10.0 270 > th dose dependent rect. 8 2
876 47.23 precipitation 0.1 90 < th dose independent rect. 3 16
889 47.23 precipitation 0.1 90 < th dose dependent rect. 3 16
904 47.24 wind 1.0 270 > th dose independent rect. 11 9
955 47.26 wind 1.0 90 > th dose independent rect. 8 19
985 47.27 radiation 10.0 1440 < th dose dependent rect. 10 7