Os07g0124100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phytosulfokines 4 precursor [Contains: Phytosulfokine-alpha (PSK- alpha) (Phytosulfokine-a); Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)].
FiT-DB / Search/ Help/ Sample detail
|
Os07g0124100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Phytosulfokines 4 precursor [Contains: Phytosulfokine-alpha (PSK- alpha) (Phytosulfokine-a); Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)].
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.79 | 0.618 | 12 | 1.6 | 1.16 | 0.903 | -0.242 | 0.393 | 0.775 | 0.718 | 63 | 877 | -- | -- |
| 172.99 | 0.613 | 12 | 1.61 | 1.16 | 0.94 | -0.298 | -- | 0.77 | 0.694 | 63 | 870 | -- | -- |
| 173 | 0.613 | 12 | 1.61 | 1.16 | 0.899 | -- | 0.518 | 0.778 | 0.711 | 63.2 | 872 | -- | -- |
| 173.4 | 0.613 | 12 | 1.62 | 1.16 | 0.936 | -- | -- | 0.77 | 0.721 | 63.67 | 873 | -- | -- |
| 204.79 | 0.667 | 11.9 | 1.59 | -- | 0.78 | -- | 0.158 | 0.989 | -- | 72 | 46 | -- | -- |
| 195.11 | 0.655 | 11.9 | 1.49 | 1.02 | -- | -0.274 | -- | 0.944 | 1.39 | -- | -- | -- | -- |
| 195.41 | 0.655 | 11.9 | 1.5 | 1.02 | -- | -- | -- | 0.945 | 1.42 | -- | -- | -- | -- |
| 204.18 | 0.666 | 11.9 | 1.61 | -- | 0.787 | -- | -- | 0.948 | -- | 72.13 | 39 | -- | -- |
| 241.62 | 0.724 | 12 | -- | 1.14 | 0.723 | -- | -- | 0.661 | 0.839 | 63 | 840 | -- | -- |
| 259.98 | 0.753 | 11.9 | 1.54 | -- | -- | -- | -- | 0.967 | -- | -- | -- | -- | -- |
| 254.85 | 0.747 | 11.9 | -- | 1.05 | -- | -- | -- | 0.778 | 1.47 | -- | -- | -- | -- |
| 272.42 | 0.769 | 12 | -- | -- | 1.33 | -- | -- | 0.6 | -- | 47.88 | 47520 | -- | -- |
| 322.73 | 0.839 | 11.9 | -- | -- | -- | -- | -- | 0.796 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.85 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 2 | 151.34 | wind | 9 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 3 | 151.52 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 4 | 151.68 | wind | 7 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 6 | 151.72 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 8 | 151.76 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 23 | 152.08 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 27 | 152.12 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 30 | 152.18 | wind | 9 | 14400 | > th | dose dependent | rect. | 20 | 8 |
| 60 | 152.72 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 100 | 153.35 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 141 | 154.04 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 150 | 154.17 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 160 | 154.34 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 197 | 154.63 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 213 | 154.68 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 215 | 154.69 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 14 | 4 |
| 258 | 154.79 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 376 | 155.77 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 385 | 156.01 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 390 | 156.04 | wind | 9 | 14400 | > th | dose dependent | sin | 11 | NA |
| 412 | 156.29 | radiation | 1 | 14400 | < th | dose dependent | rect. | 24 | 2 |
| 450 | 156.91 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 473 | 157.25 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 535 | 157.77 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 575 | 158.01 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 20 | 16 |
| 659 | 158.38 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 20 | 16 |
| 711 | 158.49 | atmosphere | 1000 | 14400 | < th | dose dependent | sin | 22 | NA |
| 809 | 158.65 | atmosphere | 1005 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 931 | 158.82 | atmosphere | 1005 | 14400 | < th | dose dependent | rect. | 1 | 15 |
| 991 | 158.89 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 6 | NA |