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Os07g0123900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.9 (0.0214) R2 : 0.556
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.25 (0.0532) R2dC : 0.538 R2C : 0.526
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.221 (0.045) R2dN8 : 0.0301 R2N8 : 0.0184
σ : 0.404
deviance : 74.5
__
_____
C
peak time of C : 21.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
57.34 0.356 13.8 1.01 1.29 -1.27 -0.026 6.2 0.105 21.3 31.97 1255 -- --
59.96 0.361 13.9 0.0587 1.32 -0.584 -0.518 -- 0.183 21.2 33.41 1059 -- --
57.33 0.353 13.8 1.01 1.29 -1.27 -- 6.27 0.105 21.3 32.07 1254 -- --
58.43 0.356 14 0.0011 1.28 -0.577 -- -- 0.131 21.3 33.35 1060 -- --
152.85 0.576 13.8 1 -- -1.15 -- 5.99 0.127 -- 32.4 1398 -- --
74.07 0.403 13.9 -0.121 1.25 -- -0.143 -- 0.208 21.1 -- -- -- --
74.14 0.403 13.9 -0.116 1.25 -- -- -- 0.208 21.1 -- -- -- --
150.82 0.572 13.9 0.0137 -- -0.478 -- -- 0.286 -- 32.1 7251 -- --
58.39 0.356 14 -- 1.29 -0.586 -- -- 0.118 21.3 33.26 1060 -- --
163.95 0.598 13.9 -0.113 -- -- -- -- 0.201 -- -- -- -- --
74.5 0.404 13.9 -- 1.25 -- -- -- 0.221 21.1 -- -- -- --
150.8 0.572 13.9 -- -- -0.486 -- -- 0.269 -- 32.1 7260 -- --
164.29 0.598 13.9 -- -- -- -- -- 0.213 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 55.01 wind 7 43200 > th dose dependent rect. 12 2
2 55.16 wind 9 43200 < th dose independent rect. 12 2
6 55.45 wind 9 43200 > th dose independent rect. 12 3
25 56.00 humidity 80 43200 < th dose dependent rect. 22 1
32 56.17 wind 5 14400 < th dose independent rect. 2 10
40 56.26 humidity 80 43200 < th dose dependent rect. 5 1
44 56.33 wind 5 14400 > th dose independent rect. 3 9
50 56.44 temperature 20 14400 < th dose independent rect. 21 2
59 56.53 temperature 20 14400 > th dose independent rect. 21 2
60 56.55 humidity 80 43200 < th dose dependent rect. 3 4
65 56.60 temperature 20 14400 > th dose independent rect. 19 6
71 56.64 temperature 20 14400 > th dose independent rect. 20 4
73 56.64 humidity 80 43200 < th dose dependent rect. 22 9
75 56.65 wind 9 43200 < th dose independent rect. 3 12
83 56.71 humidity 80 43200 > th dose independent rect. 2 1
117 56.81 wind 7 43200 > th dose dependent rect. 3 12
154 56.97 temperature 20 14400 > th dose independent sin 17 NA
160 56.98 wind 7 43200 > th dose dependent rect. 24 15
161 56.99 humidity 50 1440 > th dose independent sin 11 NA
184 57.05 wind 5 14400 > th dose dependent rect. 4 7
187 57.06 wind 9 43200 > th dose independent rect. 19 20
190 57.07 humidity 70 720 > th dose independent sin 11 NA
201 57.08 wind 9 43200 > th dose independent rect. 2 13
206 57.10 radiation 40 43200 < th dose independent rect. 10 1
219 57.12 wind 9 43200 > th dose independent rect. 24 15
223 57.13 humidity 50 1440 > th dose independent rect. 15 2
230 57.14 humidity 50 1440 > th dose independent rect. 15 19
252 57.18 humidity 60 1440 < th dose dependent sin 12 NA
260 57.20 humidity 50 1440 > th dose independent rect. 15 10
262 57.20 humidity 50 1440 > th dose independent rect. 15 14
265 57.21 humidity 50 1440 > th dose independent rect. 15 12
267 57.21 radiation 40 43200 > th dose dependent rect. 10 1
277 57.22 humidity 80 43200 < th dose dependent rect. 24 1
286 57.24 humidity 80 43200 < th dose independent rect. 2 1
294 57.25 humidity 50 1440 > th dose independent rect. 15 6
296 57.25 humidity 50 1440 > th dose independent rect. 15 8
299 57.26 humidity 50 1440 < th dose independent sin 11 NA
307 57.27 temperature 25 14400 > th dose independent rect. 11 1
316 57.29 wind 9 43200 < th dose independent rect. 19 20
320 57.29 wind 5 14400 > th dose dependent rect. 20 17
322 57.30 humidity 80 43200 < th dose independent rect. 24 3
332 57.33 humidity 80 43200 < th dose independent rect. 24 1
338 57.35 temperature 20 14400 < th dose independent sin 17 NA
344 57.35 humidity 50 1440 < th dose independent rect. 15 20
361 57.38 humidity 60 1440 < th dose dependent rect. 15 18
388 57.42 humidity 60 1440 < th dose dependent rect. 15 4
406 57.43 temperature 25 14400 < th dose dependent rect. 13 2
408 57.44 humidity 50 1440 > th dose independent rect. 13 4
435 57.48 humidity 50 1440 < th dose independent rect. 15 2
440 57.48 wind 9 43200 > th dose independent rect. 11 10
490 57.51 humidity 50 1440 < th dose dependent rect. 16 1
492 57.51 temperature 25 14400 < th dose dependent rect. 11 7
522 57.57 wind 5 14400 < th dose independent sin 6 NA
557 57.62 wind 5 14400 > th dose dependent sin 6 NA
560 57.62 wind 9 43200 > th dose dependent rect. 11 10
562 57.63 wind 5 14400 > th dose independent sin 6 NA
563 57.63 temperature 25 14400 < th dose independent rect. 11 1
586 57.67 wind 9 43200 < th dose independent rect. 11 10
588 57.67 humidity 70 720 > th dose independent rect. 16 18
594 57.69 humidity 60 1440 < th dose independent sin 14 NA
601 57.71 radiation 30 14400 > th dose independent rect. 16 1
639 57.75 temperature 30 1440 > th dose dependent rect. 15 3
645 57.76 radiation 40 1440 > th dose dependent rect. 13 1
667 57.79 humidity 50 1440 > th dose independent rect. 7 10
700 57.81 humidity 50 1440 > th dose independent rect. 9 8
745 57.86 humidity 50 1440 > th dose independent rect. 20 21
746 57.86 humidity 50 1440 > th dose independent rect. 18 23
750 57.87 wind 7 43200 > th dose independent sin 3 NA
783 57.90 humidity 50 1440 > th dose independent rect. 22 19
809 57.93 humidity 50 1440 > th dose independent rect. 24 17
813 57.94 wind 7 43200 < th dose independent sin 3 NA
821 57.94 temperature 30 1440 > th dose dependent sin 13 NA
888 57.98 humidity 50 1440 > th dose independent rect. 15 23
945 58.06 humidity 80 43200 < th dose independent rect. 5 1
995 58.10 wind 9 43200 > th dose independent rect. 11 14