Os07g0123700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : PUL domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0123700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : PUL domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11.82 | 0.162 | 10.7 | 0.298 | 0.395 | 0.433 | 0.0627 | 0.18 | 0.0905 | 18.4 | 25.3 | 365 | -- | -- |
| 11.85 | 0.16 | 10.6 | 0.329 | 0.396 | 0.42 | 0.0289 | -- | 0.0975 | 18.4 | 25.4 | 339 | -- | -- |
| 11.82 | 0.16 | 10.7 | 0.301 | 0.395 | 0.435 | -- | 0.164 | 0.0911 | 18.5 | 25.3 | 362 | -- | -- |
| 11.85 | 0.16 | 10.6 | 0.328 | 0.395 | 0.419 | -- | -- | 0.0975 | 18.4 | 25.4 | 343 | -- | -- |
| 17.99 | 0.198 | 10.6 | 0.253 | -- | 0.382 | -- | 0.304 | 0.0631 | -- | 25.81 | 1365 | -- | -- |
| 14.4 | 0.178 | 10.7 | 0.219 | 0.337 | -- | -0.00228 | -- | 0.00992 | 18.7 | -- | -- | -- | -- |
| 14.4 | 0.178 | 10.7 | 0.219 | 0.337 | -- | -- | -- | 0.00992 | 18.7 | -- | -- | -- | -- |
| 18.09 | 0.198 | 10.6 | 0.334 | -- | 0.398 | -- | -- | 0.0903 | -- | 26.3 | 1382 | -- | -- |
| 14.38 | 0.177 | 10.7 | -- | 0.366 | 0.277 | -- | -- | 0.0386 | 18.5 | 25.18 | 356 | -- | -- |
| 20.33 | 0.211 | 10.7 | 0.212 | -- | -- | -- | -- | 0.00315 | -- | -- | -- | -- | -- |
| 15.67 | 0.185 | 10.7 | -- | 0.334 | -- | -- | -- | -0.0145 | 18.7 | -- | -- | -- | -- |
| 20.58 | 0.211 | 10.7 | -- | -- | 0.236 | -- | -- | 0.0209 | -- | 26.3 | 1380 | -- | -- |
| 21.51 | 0.216 | 10.7 | -- | -- | -- | -- | -- | -0.0203 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 10.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 15 |
| 2 | 10.92 | temperature | 15 | 270 | > th | dose dependent | sin | 10 | NA |
| 3 | 10.94 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 10 |
| 34 | 11.16 | temperature | 30 | 270 | < th | dose dependent | sin | 10 | NA |
| 106 | 11.42 | temperature | 20 | 30 | > th | dose independent | rect. | 11 | 18 |
| 127 | 11.47 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 13 |
| 131 | 11.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 6 |
| 145 | 11.49 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 15 |
| 147 | 11.49 | temperature | 20 | 270 | > th | dose independent | rect. | 7 | 22 |
| 152 | 11.50 | temperature | 25 | 720 | < th | dose independent | sin | 13 | NA |
| 161 | 11.51 | temperature | 25 | 720 | > th | dose independent | sin | 13 | NA |
| 171 | 11.52 | temperature | 25 | 720 | < th | dose independent | rect. | 18 | 7 |
| 172 | 11.52 | temperature | 20 | 270 | > th | dose independent | rect. | 19 | 9 |
| 181 | 11.53 | temperature | 25 | 720 | < th | dose independent | rect. | 16 | 16 |
| 184 | 11.53 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 199 | 11.54 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 7 |
| 214 | 11.55 | temperature | 15 | 10 | > th | dose dependent | rect. | 11 | 18 |
| 285 | 11.61 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 12 |
| 338 | 11.64 | temperature | 25 | 720 | < th | dose independent | rect. | 20 | 13 |
| 348 | 11.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 13 |
| 356 | 11.65 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 15 |
| 364 | 11.65 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 14 |
| 613 | 11.77 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 680 | 11.80 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 4 |
| 800 | 11.85 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 22 |
| 865 | 11.88 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 880 | 11.88 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 889 | 11.89 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 9 |
| 999 | 11.93 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 7 |