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Os07g0120700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.28 (0.0194) R2 : 0.564
β1 : 0.952 (0.0712) R2dD : 0.177 R2D : 0.18
β2 : 0.92 (0.0466) R2dC : 0.373 R2C : 0.361
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.122 (0.0415) R2dN8 : 0.011 R2N8 : 0.0252
σ : 0.366
deviance : 61
__
_____
C
peak time of C : 13.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
54.67 0.347 7.26 0.829 0.924 0.0354 -0.0833 1.9 -0.129 13.4 0.1109 8315 -- --
55.76 0.348 7.28 0.657 0.919 0.437 -0.0591 -- -0.0807 13.4 0.8514 23424 -- --
54.69 0.344 7.26 0.828 0.924 0.0518 -- 1.91 -0.13 13.4 0.04254 8314 -- --
55.54 0.347 7.26 0.664 0.918 0.486 -- -- -0.0681 13.4 0.9714 27646 -- --
105.39 0.478 7.28 0.725 -- 0.0247 -- 2.32 -0.195 -- 0.127 17018 -- --
60.94 0.366 7.28 0.956 0.92 -- -0.122 -- -0.121 13.4 -- -- -- --
61 0.366 7.28 0.952 0.92 -- -- -- -0.122 13.4 -- -- -- --
106.6 0.481 7.28 0.632 -- 0.46 -- -- -0.0865 -- 1 29940 -- --
62.42 0.368 7.27 -- 0.895 0.637 -- -- -0.0742 13.3 1.126 47520 -- --
113.11 0.497 7.29 0.916 -- -- -- -- -0.141 -- -- -- -- --
84.89 0.431 7.3 -- 0.904 -- -- -- -0.228 13.3 -- -- -- --
111.87 0.493 7.28 -- -- 0.653 -- -- -0.0861 -- 1 47520 -- --
135.24 0.543 7.32 -- -- -- -- -- -0.243 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 52.83 radiation 30.0 10 < th dose dependent rect. 2 10
20 53.54 temperature 15.0 90 > th dose independent rect. 6 19
22 53.58 radiation 30.0 1440 < th dose independent rect. 3 4
25 53.60 wind 9.0 270 < th dose independent rect. 3 23
26 53.60 radiation 20.0 10 < th dose dependent rect. 2 8
48 53.79 wind 7.0 30 < th dose independent rect. 6 20
54 53.86 precipitation 0.1 14400 > th dose dependent rect. 19 5
59 53.88 temperature 15.0 10 > th dose independent rect. 6 20
65 53.92 wind 9.0 43200 < th dose dependent rect. 12 1
80 53.99 precipitation 0.1 14400 > th dose dependent rect. 19 3
83 54.00 precipitation 0.1 14400 > th dose independent rect. 17 7
84 54.00 precipitation 0.1 14400 < th dose independent rect. 17 7
88 54.00 precipitation 0.1 14400 < th dose dependent rect. 17 7
91 54.01 wind 1.0 43200 > th dose dependent rect. 12 1
98 54.02 humidity 50.0 10 > th dose dependent rect. 2 13
114 54.06 radiation 20.0 90 < th dose independent rect. 1 10
118 54.08 temperature 10.0 270 > th dose dependent rect. 2 1
127 54.10 precipitation 0.1 14400 > th dose independent rect. 19 2
138 54.13 precipitation 0.1 14400 < th dose independent rect. 19 2
140 54.13 precipitation 0.1 14400 < th dose dependent rect. 19 2
143 54.14 precipitation 0.1 14400 > th dose independent rect. 18 4
148 54.15 precipitation 0.1 14400 < th dose independent rect. 18 4
150 54.15 precipitation 0.1 14400 < th dose dependent rect. 18 4
158 54.18 wind 1.0 43200 > th dose dependent rect. 24 17
167 54.20 wind 3.0 43200 > th dose independent rect. 11 2
191 54.23 wind 7.0 43200 < th dose dependent rect. 24 17
206 54.25 radiation 20.0 90 < th dose independent rect. 1 14
214 54.26 precipitation 0.1 14400 > th dose independent rect. 9 15
215 54.26 precipitation 0.1 14400 < th dose independent rect. 9 15
218 54.26 precipitation 0.1 14400 < th dose dependent rect. 9 15
241 54.28 humidity 70.0 10 > th dose dependent rect. 2 10
244 54.28 humidity 50.0 10 > th dose dependent rect. 2 16
258 54.30 precipitation 0.1 14400 < th dose independent rect. 11 13
259 54.30 precipitation 0.1 14400 < th dose dependent rect. 11 13
261 54.31 precipitation 0.1 14400 > th dose independent rect. 11 13
272 54.32 precipitation 0.1 14400 > th dose independent sin 16 NA
273 54.32 precipitation 0.1 14400 < th dose independent sin 16 NA
274 54.32 wind 1.0 4320 > th dose independent rect. 1 2
284 54.32 precipitation 0.1 14400 < th dose dependent sin 16 NA
315 54.34 radiation 20.0 90 < th dose independent rect. 1 12
321 54.35 radiation 20.0 10 < th dose independent rect. 2 10
331 54.36 radiation 20.0 90 < th dose independent rect. 1 16
361 54.38 wind 1.0 43200 > th dose dependent rect. 4 12
374 54.39 wind 1.0 43200 > th dose dependent rect. 11 3
393 54.41 wind 3.0 43200 > th dose independent rect. 1 15
411 54.42 radiation 30.0 30 < th dose independent rect. 2 18
416 54.42 precipitation 0.1 14400 > th dose dependent sin 14 NA
421 54.42 wind 9.0 43200 < th dose dependent rect. 4 12
436 54.43 wind 9.0 270 < th dose independent rect. 2 1
437 54.43 temperature 10.0 270 > th dose independent rect. 2 1
439 54.43 temperature 30.0 270 < th dose independent rect. 2 1
440 54.43 humidity 50.0 270 > th dose independent rect. 2 1
443 54.43 atmosphere 995.0 270 > th dose independent rect. 2 1
444 54.43 atmosphere 1010.0 270 < th dose independent rect. 2 1
446 54.43 radiation 1.0 270 < th dose independent rect. 2 1
451 54.43 precipitation 0.1 270 < th dose independent rect. 2 1
457 54.43 radiation 1.0 270 < th dose dependent rect. 2 1
462 54.43 precipitation 0.1 270 < th dose dependent rect. 2 1
464 54.43 precipitation 0.1 14400 > th dose dependent rect. 17 10
473 54.43 wind 9.0 30 < th dose dependent rect. 7 19
498 54.45 wind 1.0 43200 > th dose dependent sin 2 NA
556 54.48 wind 3.0 43200 < th dose independent rect. 24 16
578 54.49 wind 9.0 43200 < th dose dependent sin 2 NA
594 54.50 atmosphere 995.0 270 > th dose dependent rect. 2 1
632 54.52 humidity 80.0 43200 > th dose dependent rect. 4 6
674 54.55 humidity 80.0 43200 < th dose dependent rect. 24 1
710 54.57 wind 3.0 43200 < th dose independent rect. 11 1
715 54.57 humidity 80.0 43200 < th dose dependent rect. 22 4
746 54.59 humidity 60.0 10 > th dose dependent rect. 2 7
768 54.60 precipitation 0.1 14400 > th dose dependent rect. 13 14
770 54.60 precipitation 0.1 14400 > th dose dependent rect. 9 18
799 54.62 temperature 10.0 30 > th dose dependent rect. 2 4
806 54.62 precipitation 0.1 14400 > th dose dependent rect. 13 12
816 54.63 wind 3.0 43200 > th dose independent sin 3 NA
886 54.66 wind 9.0 270 < th dose dependent rect. 2 1
888 54.66 humidity 80.0 43200 < th dose dependent rect. 4 1
931 54.68 wind 5.0 270 < th dose independent rect. 5 8
951 54.69 wind 3.0 43200 < th dose independent sin 3 NA
971 54.69 precipitation 0.1 14400 > th dose dependent rect. 17 21