Os07g0118300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0118300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.94 | 0.22 | 9.13 | 0.0526 | 0.115 | 0.382 | -0.055 | 2.15 | -0.0789 | 15.7 | 1.243 | 1462 | -- | -- |
| 23.48 | 0.226 | 9.09 | 0.276 | 0.239 | 0.323 | -0.171 | -- | 0.0087 | 15.5 | 8.252 | 3275 | -- | -- |
| 21.94 | 0.218 | 9.13 | 0.0569 | 0.117 | 0.337 | -- | 2.05 | -0.0791 | 15.8 | 1.55 | 1465 | -- | -- |
| 23.55 | 0.226 | 9.09 | 0.277 | 0.241 | 0.32 | -- | -- | 0.0073 | 15.6 | 8.052 | 3278 | -- | -- |
| 22.62 | 0.222 | 9.13 | 0.0628 | -- | 0.297 | -- | 1.92 | -0.0767 | -- | 1.776 | 1452 | -- | -- |
| 24.62 | 0.233 | 9.1 | 0.285 | 0.118 | -- | -0.112 | -- | -0.0424 | 15.8 | -- | -- | -- | -- |
| 24.65 | 0.233 | 9.1 | 0.283 | 0.119 | -- | -- | -- | -0.0431 | 16.1 | -- | -- | -- | -- |
| 24.21 | 0.229 | 9.09 | 0.267 | -- | 0.165 | -- | -- | 0.0119 | -- | 25.62 | 15801 | -- | -- |
| 25.35 | 0.235 | 9.09 | -- | 0.234 | 0.348 | -- | -- | -0.000813 | 15.8 | 10.01 | 3286 | -- | -- |
| 25.42 | 0.236 | 9.1 | 0.278 | -- | -- | -- | -- | -0.0462 | -- | -- | -- | -- | -- |
| 26.77 | 0.242 | 9.11 | -- | 0.113 | -- | -- | -- | -0.0746 | 16.2 | -- | -- | -- | -- |
| 25.84 | 0.237 | 9.09 | -- | -- | 0.198 | -- | -- | -0.00156 | -- | 96.43 | 18441 | -- | -- |
| 27.46 | 0.245 | 9.11 | -- | -- | -- | -- | -- | -0.0771 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.70 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 33 | 20.91 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 6 |
| 34 | 20.92 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 36 | 20.92 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 2 | 5 |
| 40 | 20.93 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 41 | 20.93 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 170 | 21.21 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 179 | 21.23 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 187 | 21.25 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 188 | 21.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 193 | 21.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 5 |
| 220 | 21.30 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 230 | 21.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 251 | 21.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 6 |
| 285 | 21.40 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 7 |
| 305 | 21.43 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 322 | 21.44 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 333 | 21.46 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 3 | 2 |
| 341 | 21.46 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 18 |
| 367 | 21.49 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 2 | 2 |
| 370 | 21.49 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 1 | 5 |
| 413 | 21.53 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 423 | 21.54 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 459 | 21.58 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 463 | 21.58 | temperature | 25.0 | 90 | < th | dose independent | rect. | 23 | 7 |
| 481 | 21.59 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 24 | 12 |
| 492 | 21.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 498 | 21.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 504 | 21.61 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 515 | 21.62 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 21 |
| 545 | 21.64 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 15 |
| 556 | 21.65 | temperature | 25.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 558 | 21.65 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 563 | 21.65 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 24 | 12 |
| 605 | 21.67 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 612 | 21.67 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 6 | 9 |
| 616 | 21.68 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 6 |
| 621 | 21.68 | wind | 1.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 638 | 21.69 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 6 | 6 |
| 652 | 21.70 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 11 |
| 658 | 21.70 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 660 | 21.70 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 6 | 4 |
| 668 | 21.71 | temperature | 25.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 677 | 21.71 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 10 |
| 678 | 21.71 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 11 |
| 687 | 21.71 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 695 | 21.71 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 10 |
| 703 | 21.72 | radiation | 1.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 716 | 21.72 | wind | 9.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 724 | 21.73 | radiation | 1.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 725 | 21.73 | radiation | 1.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 726 | 21.73 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 748 | 21.74 | radiation | 1.0 | 1440 | > th | dose independent | sin | 10 | NA |
| 751 | 21.74 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 753 | 21.74 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 757 | 21.74 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 786 | 21.75 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 10 |
| 795 | 21.75 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 830 | 21.77 | temperature | 25.0 | 30 | > th | dose independent | rect. | 17 | 16 |
| 852 | 21.78 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 853 | 21.78 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 864 | 21.78 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 20 |
| 876 | 21.78 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 6 | 21 |
| 887 | 21.79 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 897 | 21.79 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 14 | 16 |
| 915 | 21.79 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 932 | 21.80 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 960 | 21.80 | temperature | 20.0 | 90 | > th | dose independent | rect. | 6 | 15 |
| 990 | 21.80 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 22 | 2 |