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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0112000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Dimethylaniline monooxygenase-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.36 (0.0373) R2 : 0.612
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.56 (0.096) R2dC : 0.606 R2C : 0.598
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.27 (0.0785) R2dN8 : 0.013 R2N8 : 0.00506
σ : 0.703
deviance : 226.08
__
_____
C
peak time of C : 16.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
206.31 0.675 5.33 0.00429 2.54 -0.782 -0.315 0.166 0.407 16.5 20.1 848 -- --
206.38 0.669 5.34 -0.024 2.54 -0.802 -0.324 -- 0.401 16.5 20.17 857 -- --
206.35 0.669 5.33 0.0183 2.54 -0.754 -- 0.258 0.415 16.5 20.44 859 -- --
206.54 0.669 5.34 -0.023 2.54 -0.781 -- -- 0.411 16.5 20.4 863 -- --
544.65 1.09 5.31 0.144 -- -0.903 -- 0.629 0.443 -- 20.1 1047 -- --
222.64 0.7 5.37 -0.323 2.56 -- -0.477 -- 0.236 16.3 -- -- -- --
223.26 0.7 5.37 -0.327 2.55 -- -- -- 0.233 16.4 -- -- -- --
543.43 1.09 5.31 0.0276 -- -1.14 -- -- 0.396 -- 19.99 1055 -- --
206.55 0.669 5.34 -- 2.54 -0.794 -- -- 0.41 16.5 20.44 863 -- --
573.44 1.12 5.36 -0.428 -- -- -- -- 0.166 -- -- -- -- --
226.08 0.703 5.36 -- 2.56 -- -- -- 0.27 16.3 -- -- -- --
543.45 1.09 5.31 -- -- -1.13 -- -- 0.392 -- 19.98 1055 -- --
578.27 1.12 5.35 -- -- -- -- -- 0.213 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 195.24 temperature 10 270 > th dose dependent rect. 3 10
4 196.56 temperature 20 720 > th dose independent rect. 3 2
8 197.12 temperature 20 270 > th dose independent rect. 3 10
9 197.75 temperature 25 270 > th dose independent rect. 21 6
17 198.58 temperature 15 720 > th dose dependent rect. 3 3
19 198.77 temperature 20 10 > th dose dependent rect. 5 11
20 198.86 temperature 15 720 > th dose dependent rect. 1 5
21 198.93 temperature 30 10 < th dose dependent rect. 24 17
44 199.89 temperature 20 10 > th dose dependent rect. 3 13
59 200.37 temperature 25 270 > th dose dependent rect. 22 6
88 201.21 temperature 30 10 < th dose dependent rect. 24 14
100 201.45 temperature 20 270 > th dose independent rect. 3 19
124 201.88 temperature 25 10 > th dose dependent rect. 20 20
140 202.32 temperature 20 720 < th dose independent rect. 3 2
143 202.33 temperature 30 10 < th dose dependent rect. 24 12
175 202.72 temperature 25 10 > th dose dependent sin 4 NA
184 202.81 temperature 20 720 < th dose independent rect. 1 5
188 202.84 temperature 30 10 < th dose dependent rect. 2 15
204 203.06 temperature 20 720 > th dose independent rect. 18 19
234 203.36 temperature 20 720 > th dose independent rect. 18 13
289 203.89 temperature 25 90 > th dose independent rect. 24 4
291 203.89 temperature 20 720 < th dose independent rect. 24 13
302 203.98 temperature 30 10 < th dose dependent sin 3 NA
303 203.98 radiation 10 43200 < th dose dependent rect. 19 6
315 204.06 temperature 20 720 > th dose independent sin 7 NA
320 204.12 temperature 20 720 < th dose independent rect. 24 11
330 204.17 temperature 15 10 > th dose dependent sin 3 NA
335 204.19 temperature 20 720 > th dose independent rect. 1 21
339 204.20 temperature 20 720 < th dose independent sin 7 NA
346 204.25 temperature 25 720 < th dose dependent rect. 24 7
385 204.42 temperature 25 270 < th dose independent rect. 21 10
403 204.54 atmosphere 1015 1440 < th dose independent rect. 1 6
463 204.80 humidity 50 14400 > th dose independent rect. 19 6
485 204.91 humidity 90 1440 < th dose independent rect. 9 2
489 204.92 temperature 20 720 < th dose independent rect. 19 18
544 205.12 wind 9 1440 < th dose independent rect. 1 9
556 205.15 temperature 30 10 < th dose dependent rect. 2 12
600 205.31 temperature 20 720 < th dose independent rect. 19 12
601 205.31 radiation 40 10 < th dose dependent rect. 24 19
625 205.40 temperature 20 720 < th dose independent rect. 24 21
631 205.42 atmosphere 1005 43200 < th dose independent rect. 22 2
641 205.44 temperature 30 10 < th dose dependent rect. 7 10
647 205.46 temperature 20 720 > th dose independent rect. 10 21
648 205.46 humidity 80 1440 > th dose dependent rect. 9 2
656 205.48 temperature 10 30 > th dose dependent rect. 5 19
666 205.54 humidity 90 1440 > th dose independent rect. 9 2
687 205.61 temperature 25 720 < th dose dependent sin 7 NA
710 205.67 temperature 20 720 > th dose independent rect. 12 19
727 205.73 wind 1 270 > th dose independent rect. 13 14
740 205.76 wind 9 14400 > th dose independent rect. 21 16
746 205.78 wind 9 14400 < th dose independent rect. 1 12
755 205.80 humidity 60 30 > th dose dependent rect. 17 7
757 205.81 atmosphere 1015 1440 < th dose independent rect. 1 4
843 206.01 temperature 30 720 < th dose dependent rect. 24 1
845 206.02 atmosphere 1015 1440 < th dose independent rect. 1 8
878 206.09 wind 9 14400 < th dose independent rect. 21 16
912 206.18 atmosphere 1005 43200 < th dose independent rect. 11 1
958 206.29 temperature 20 720 < th dose dependent rect. 20 10
965 206.32 wind 7 1440 < th dose independent rect. 1 7
974 206.34 wind 9 14400 > th dose independent rect. 3 10
999 206.39 wind 9 14400 > th dose dependent rect. 21 16