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Os07g0111900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Flavin-containing monooxygenase FMO family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.68 (0.0479) R2 : 0.634
β1 : -0.813 (0.179) R2dD : 0.0183 R2D : 0.004
β2 : 2.33 (0.126) R2dC : 0.289 R2C : 0.38
β3 : -4.15 (0.283) R2dE : 0.207 R2E : 0.307
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.408 (0.107) R2dN8 : 0.0175 R2N8 : 0.0423
σ : 0.887
deviance : 362.66
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C
peak time of C : 17.2
E
wheather : temperature
threshold : 25.8
memory length : 298
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 21.6
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
359.28 0.891 6.7 -0.95 2.19 -3.79 1.03 1.58 0.372 17.2 26.28 285 22.1 --
361.66 0.886 6.68 -0.813 2.32 -4.12 0.698 -- 0.401 17.1 25.82 303 21.7 --
361.6 0.886 6.7 -0.893 2.28 -3.82 -- 1.33 0.385 17.2 26.11 289 21.9 --
362.66 0.887 6.68 -0.813 2.33 -4.15 -- -- 0.408 17.2 25.8 298 21.6 --
395.85 0.927 6.65 -0.823 -- -4.55 -- 0.184 0.355 -- 32.05 214 0.576 --
495.23 1.04 6.6 -0.171 2.89 -- 0.24 -- 0.888 18.2 -- -- -- --
495.36 1.04 6.6 -0.174 2.89 -- -- -- 0.888 18.2 -- -- -- --
395.83 0.927 6.64 -0.764 -- -4.48 -- -- 0.385 -- 32.4 219 0.664 --
379.02 0.907 6.67 -- 2.37 -3.71 -- -- 0.497 17.3 25.9 295 21.7 --
929.98 1.42 6.54 -0.254 -- -- -- -- 0.825 -- -- -- -- --
496.16 1.04 6.59 -- 2.9 -- -- -- 0.908 18.2 -- -- -- --
410.08 0.943 6.61 -- -- -4.33 -- -- 0.523 -- 33.57 221 0.808 --
931.67 1.42 6.54 -- -- -- -- -- 0.853 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 364.01 temperature 25 270 < th dose dependent rect. 3 13
3 364.82 temperature 25 270 < th dose dependent sin 3 NA
16 369.25 temperature 25 270 < th dose dependent rect. 1 16
30 371.65 temperature 15 270 > th dose dependent sin 5 NA
64 376.94 wind 7 43200 < th dose independent rect. 16 2
65 377.09 wind 9 43200 > th dose dependent rect. 16 1
74 377.87 wind 7 43200 > th dose independent rect. 16 2
93 379.28 radiation 20 43200 < th dose independent rect. 13 1
99 379.72 wind 5 43200 > th dose dependent rect. 16 2
121 380.88 temperature 25 720 < th dose dependent rect. 22 14
144 382.29 temperature 25 270 < th dose independent sin 6 NA
151 382.40 wind 3 43200 < th dose dependent rect. 20 3
178 383.32 radiation 10 43200 < th dose independent rect. 12 5
183 383.39 radiation 10 43200 > th dose dependent rect. 13 1
216 384.16 wind 7 43200 > th dose independent rect. 14 8
217 384.17 radiation 30 43200 < th dose independent rect. 10 4
219 384.18 wind 7 43200 < th dose independent rect. 14 8
242 384.53 temperature 20 14400 < th dose dependent rect. 2 4
252 384.63 radiation 30 43200 < th dose independent rect. 9 7
259 384.74 temperature 20 14400 < th dose dependent rect. 5 1
265 384.85 wind 7 43200 > th dose independent rect. 13 11
277 384.96 radiation 30 43200 < th dose independent rect. 9 17
278 384.96 radiation 30 43200 < th dose independent rect. 9 20
287 384.98 radiation 30 43200 < th dose independent rect. 9 12
298 385.04 wind 7 43200 > th dose dependent rect. 14 10
308 385.20 wind 7 43200 < th dose independent rect. 13 11
321 385.30 wind 7 43200 > th dose dependent rect. 13 14
324 385.32 radiation 10 43200 < th dose independent rect. 12 13
328 385.33 radiation 10 43200 < th dose independent rect. 12 9
330 385.33 radiation 10 43200 < th dose independent rect. 12 11
347 385.41 radiation 40 43200 < th dose dependent rect. 13 1
398 385.65 radiation 20 43200 < th dose independent rect. 13 22
419 385.76 wind 7 43200 > th dose dependent rect. 10 10
426 385.81 wind 1 43200 > th dose dependent rect. 19 3
439 385.89 radiation 30 43200 < th dose independent sin 22 NA
444 385.92 radiation 30 43200 < th dose independent rect. 10 1
453 385.93 wind 3 43200 > th dose dependent rect. 19 1
461 385.96 radiation 10 43200 < th dose independent sin 19 NA
476 386.05 wind 7 43200 > th dose dependent rect. 11 18
482 386.08 radiation 30 43200 < th dose independent rect. 15 23
496 386.13 radiation 30 43200 < th dose independent rect. 22 18
497 386.13 radiation 30 43200 < th dose independent rect. 20 20
501 386.14 radiation 30 43200 < th dose independent rect. 3 13
503 386.14 radiation 30 43200 < th dose independent rect. 24 16
504 386.14 wind 9 43200 < th dose independent rect. 13 17
509 386.14 wind 9 43200 > th dose independent rect. 11 20
529 386.17 radiation 10 43200 < th dose independent rect. 12 20
556 386.28 wind 7 43200 > th dose independent sin 18 NA
558 386.28 wind 7 43200 > th dose dependent sin 17 NA
572 386.32 wind 9 43200 < th dose independent rect. 11 20
575 386.33 wind 9 43200 > th dose independent rect. 13 17
596 386.37 radiation 30 43200 < th dose independent no NA NA
604 386.37 radiation 30 43200 < th dose independent rect. 24 21
605 386.37 radiation 30 43200 < th dose independent rect. 3 22
613 386.37 radiation 30 43200 < th dose independent rect. 22 23
614 386.37 radiation 30 43200 < th dose independent rect. 24 23
626 386.38 radiation 30 43200 < th dose independent rect. 4 17
735 386.47 radiation 10 43200 < th dose independent rect. 6 12
763 386.52 wind 9 43200 < th dose independent sin 17 NA
812 386.62 temperature 25 270 < th dose independent rect. 23 13
836 386.69 wind 7 43200 > th dose dependent rect. 10 13
860 386.75 radiation 10 43200 < th dose independent rect. 24 17