Os07g0110100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0110100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.21 | 0.177 | 12.1 | -0.291 | 0.404 | -0.466 | -0.223 | 1.27 | -0.11 | 16.9 | 30.1 | 2684 | -- | -- |
| 14.09 | 0.175 | 12.1 | -0.511 | 0.398 | -0.304 | -0.302 | -- | -0.0408 | 16.8 | 29.06 | 2751 | -- | -- |
| 14.34 | 0.176 | 12.1 | -0.287 | 0.404 | -0.468 | -- | 1.31 | -0.111 | 17 | 30.1 | 2674 | -- | -- |
| 14.17 | 0.175 | 12.1 | -0.516 | 0.403 | -0.313 | -- | -- | -0.0371 | 17.1 | 29.1 | 2675 | -- | -- |
| 22.86 | 0.223 | 12.1 | -0.261 | -- | -0.519 | -- | 1.54 | -0.132 | -- | 30.3 | 2686 | -- | -- |
| 18.61 | 0.202 | 12.2 | -0.625 | 0.424 | -- | -0.182 | -- | -0.0683 | 16.6 | -- | -- | -- | -- |
| 18.7 | 0.203 | 12.2 | -0.626 | 0.423 | -- | -- | -- | -0.0693 | 16.7 | -- | -- | -- | -- |
| 22.56 | 0.221 | 12.1 | -0.528 | -- | -0.344 | -- | -- | -0.0446 | -- | 29.1 | 2687 | -- | -- |
| 20.95 | 0.213 | 12.1 | -- | 0.406 | -0.409 | -- | -- | 0.0303 | 17.2 | 28.7 | 2683 | -- | -- |
| 28.21 | 0.248 | 12.2 | -0.643 | -- | -- | -- | -- | -0.0803 | -- | -- | -- | -- | -- |
| 29.04 | 0.252 | 12.1 | -- | 0.435 | -- | -- | -- | 0.000515 | 16.6 | -- | -- | -- | -- |
| 23.86 | 0.228 | 12.1 | -- | -- | -0.579 | -- | -- | 0.184 | -- | 21.26 | 47520 | -- | -- |
| 39.1 | 0.292 | 12.1 | -- | -- | -- | -- | -- | -0.00903 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.21 | wind | 1.0 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 3 | 13.28 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 5 | 13.32 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 6 | 13.34 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 7 | 4 |
| 24 | 13.46 | wind | 1.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 42 | 13.55 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 121 | 13.87 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 123 | 13.88 | wind | 1.0 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 124 | 13.88 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 21 |
| 125 | 13.89 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 137 | 13.90 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 142 | 13.90 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 154 | 13.93 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 14 |
| 155 | 13.93 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 14 |
| 171 | 13.94 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 176 | 13.95 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 177 | 13.95 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 218 | 13.96 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 17 |
| 231 | 13.97 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 21 | 17 |
| 232 | 13.98 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 242 | 13.99 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 22 | 13 |
| 248 | 14.00 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 24 | 10 |
| 263 | 14.01 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 286 | 14.02 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 288 | 14.02 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 2 | 8 |
| 315 | 14.03 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 323 | 14.05 | radiation | 1.0 | 4320 | > th | dose independent | sin | 8 | NA |
| 324 | 14.05 | radiation | 1.0 | 4320 | < th | dose independent | sin | 8 | NA |
| 325 | 14.05 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 355 | 14.07 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 382 | 14.07 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 21 | 14 |
| 387 | 14.08 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 410 | 14.08 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 411 | 14.08 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 414 | 14.08 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 443 | 14.09 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 467 | 14.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 15 |
| 470 | 14.09 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 505 | 14.11 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 8 | NA |
| 508 | 14.11 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 537 | 14.12 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 3 | NA |
| 547 | 14.12 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 556 | 14.13 | wind | 1.0 | 14400 | < th | dose independent | rect. | 20 | 4 |
| 570 | 14.13 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 15 |
| 610 | 14.15 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 611 | 14.15 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 632 | 14.16 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 668 | 14.17 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 13 | 17 |
| 685 | 14.17 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 19 |
| 693 | 14.18 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 724 | 14.19 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 18 | 12 |
| 729 | 14.19 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 17 |
| 732 | 14.19 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 21 |
| 737 | 14.20 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 22 | 18 |
| 738 | 14.20 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 23 | 18 |
| 776 | 14.21 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 779 | 14.21 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 24 | 16 |
| 780 | 14.21 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 13 | 17 |
| 811 | 14.21 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 815 | 14.22 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 870 | 14.22 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 872 | 14.22 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 874 | 14.23 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 875 | 14.23 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 879 | 14.23 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 1 | 15 |
| 926 | 14.23 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 9 | 12 |
| 927 | 14.23 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 13 |
| 935 | 14.23 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 15 |
| 942 | 14.24 | wind | 7.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 949 | 14.24 | wind | 7.0 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 950 | 14.24 | wind | 7.0 | 43200 | < th | dose independent | rect. | 3 | 10 |