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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0109800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.98 (0.0222) R2 : 0.0277
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.168 (0.0467) R2dN8 : 0.0357 R2N8 : 0.0277
σ : 0.418
deviance : 80.02
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
72.45 0.4 3.01 -0.34 0.0331 -0.413 -0.498 1.87 0.121 9.35 1.028 16 -- --
75.33 0.404 2.99 -0.269 0.0521 -0.251 -0.532 -- 0.142 7.88 1.1 16 -- --
73.34 0.399 3.01 -0.356 0.0359 -0.409 -- 1.81 0.121 9.01 1.019 16 -- --
76.14 0.406 2.99 -0.282 0.0519 -0.272 -- -- 0.141 7.74 1.005 16 -- --
73.42 0.399 3.01 -0.357 -- -0.416 -- 1.82 0.121 -- 1.024 16 -- --
77.13 0.412 2.99 -0.237 0.105 -- -0.523 -- 0.138 7.16 -- -- -- --
77.74 0.413 2.99 -0.25 0.114 -- -- -- 0.138 5.71 -- -- -- --
76.28 0.407 2.99 -0.284 -- -0.289 -- -- 0.142 -- 1.01 16 -- --
78.18 0.414 2.98 -- 0.0619 -0.195 -- -- 0.172 7.38 1.075 16 -- --
78.42 0.414 2.99 -0.246 -- -- -- -- 0.141 -- -- -- -- --
79.38 0.417 2.98 -- 0.111 -- -- -- 0.166 5.81 -- -- -- --
78.37 0.412 2.98 -- -- -0.251 -- -- 0.173 -- 1.038 16 -- --
80.02 0.418 2.98 -- -- -- -- -- 0.168 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 61.41 wind 9.0 30 < th dose independent rect. 3 23
2 61.77 temperature 20.0 30 > th dose dependent rect. 2 1
3 61.86 wind 3.0 30 < th dose dependent rect. 2 1
4 61.88 temperature 20.0 30 > th dose independent rect. 2 1
6 61.90 atmosphere 1005.0 30 > th dose dependent rect. 2 1
7 61.91 atmosphere 1005.0 30 > th dose independent rect. 2 1
12 61.98 wind 3.0 30 < th dose independent rect. 2 1
15 62.04 humidity 80.0 30 > th dose independent rect. 2 1
21 62.11 temperature 10.0 30 > th dose independent rect. 2 1
23 62.11 temperature 30.0 30 < th dose independent rect. 2 1
24 62.11 humidity 50.0 30 > th dose independent rect. 2 1
28 62.11 atmosphere 1010.0 30 < th dose independent rect. 2 1
30 62.11 radiation 1.0 30 < th dose independent rect. 2 1
35 62.11 precipitation 0.1 30 < th dose independent rect. 2 1
36 62.11 temperature 10.0 30 > th dose independent rect. 3 23
37 62.11 humidity 50.0 30 > th dose dependent rect. 2 1
40 62.11 radiation 1.0 30 < th dose dependent rect. 2 1
45 62.11 precipitation 0.1 30 < th dose dependent rect. 2 1
50 62.44 atmosphere 1015.0 30 < th dose dependent rect. 2 1
54 62.79 temperature 30.0 30 < th dose dependent rect. 2 1
63 63.21 wind 1.0 30 > th dose independent rect. 2 1
68 63.48 radiation 10.0 43200 < th dose dependent rect. 3 1
72 63.54 wind 9.0 1440 < th dose independent rect. 3 1
73 63.54 temperature 10.0 1440 > th dose independent rect. 3 1
76 63.54 temperature 30.0 1440 < th dose independent rect. 3 1
80 63.54 humidity 50.0 1440 > th dose independent rect. 3 1
89 63.54 atmosphere 995.0 1440 > th dose independent rect. 3 1
90 63.54 radiation 1.0 1440 < th dose independent rect. 3 1
110 63.54 temperature 10.0 1440 > th dose independent rect. 4 23
113 63.54 radiation 1.0 1440 < th dose dependent rect. 3 1
163 64.53 atmosphere 995.0 30 > th dose independent rect. 3 23
169 65.23 precipitation 0.1 30 < th dose independent rect. 3 23
171 65.23 precipitation 0.1 30 < th dose dependent rect. 3 23
174 65.44 temperature 25.0 90 > th dose dependent rect. 1 3
195 69.02 humidity 50.0 30 > th dose independent rect. 3 23
210 69.66 atmosphere 1015.0 720 < th dose independent rect. 3 16
216 69.86 precipitation 0.1 720 < th dose independent rect. 7 8
217 69.86 precipitation 0.1 720 < th dose dependent rect. 7 8
221 69.94 precipitation 0.1 720 < th dose independent rect. 3 16
224 69.94 precipitation 0.1 720 < th dose dependent rect. 3 16
229 70.07 temperature 10.0 30 > th dose dependent rect. 3 23
231 70.27 atmosphere 1010.0 30 < th dose independent rect. 3 23
239 70.67 temperature 10.0 720 > th dose independent rect. 7 8
240 70.67 atmosphere 1015.0 720 < th dose independent rect. 7 8
241 70.67 temperature 10.0 720 > th dose independent rect. 15 16
245 70.74 wind 9.0 720 < th dose independent rect. 19 8
249 70.85 radiation 1.0 720 < th dose dependent rect. 19 8
251 70.86 temperature 10.0 720 > th dose independent rect. 19 8
252 70.86 temperature 30.0 720 < th dose independent rect. 19 8
253 70.86 humidity 50.0 720 > th dose independent rect. 19 8
254 70.86 atmosphere 995.0 720 > th dose independent rect. 19 8
255 70.86 radiation 1.0 720 < th dose independent rect. 19 8
260 70.86 temperature 10.0 720 > th dose independent rect. 3 16
265 70.88 atmosphere 995.0 720 > th dose independent rect. 15 16
266 70.88 wind 1.0 10 < th dose independent rect. 6 21
268 70.91 atmosphere 995.0 720 > th dose independent rect. 7 8
306 71.11 wind 1.0 10 < th dose independent rect. 11 16
308 71.16 wind 1.0 10 < th dose independent rect. 22 5
318 71.18 atmosphere 995.0 720 > th dose independent rect. 3 16
334 71.34 temperature 30.0 30 < th dose independent rect. 3 23
347 71.59 humidity 90.0 90 < th dose independent rect. 2 1
349 71.64 atmosphere 1015.0 720 < th dose independent rect. 3 8
364 71.84 atmosphere 1005.0 90 > th dose dependent rect. 1 6
368 71.87 precipitation 0.1 720 < th dose independent rect. 23 16
369 71.87 precipitation 0.1 720 < th dose dependent rect. 23 16
379 72.02 temperature 15.0 90 > th dose dependent rect. 7 18
380 72.03 wind 1.0 30 > th dose independent rect. 3 23
398 72.14 wind 9.0 720 < th dose independent rect. 7 8
403 72.19 atmosphere 1015.0 1440 < th dose independent rect. 3 1
406 72.20 precipitation 0.1 720 < th dose independent rect. 19 8
407 72.20 precipitation 0.1 720 < th dose dependent rect. 19 8
415 72.29 wind 1.0 10 > th dose independent sin 16 NA
417 72.31 wind 3.0 30 < th dose dependent rect. 2 5
423 72.35 radiation 10.0 10 > th dose independent rect. 6 1
449 72.35 wind 1.0 10 > th dose independent rect. 7 23
450 72.35 radiation 10.0 10 > th dose dependent rect. 6 1
484 72.41 precipitation 0.1 720 < th dose independent rect. 3 8
485 72.41 precipitation 0.1 720 < th dose dependent rect. 3 8
502 72.52 temperature 25.0 1440 < th dose independent rect. 1 1
519 72.63 wind 9.0 30 < th dose dependent rect. 3 23
522 72.65 temperature 15.0 720 > th dose independent rect. 3 12
535 72.76 radiation 1.0 30 < th dose independent rect. 3 23
549 72.80 wind 9.0 30 < th dose independent rect. 7 23
567 72.86 wind 9.0 720 < th dose independent rect. 3 8
574 72.87 radiation 1.0 30 < th dose dependent rect. 3 23
577 72.91 temperature 15.0 720 > th dose independent rect. 3 6
589 72.97 temperature 15.0 720 > th dose independent rect. 21 18
596 72.99 temperature 15.0 90 > th dose independent rect. 7 18
620 73.11 temperature 15.0 720 > th dose independent rect. 5 10
625 73.13 wind 1.0 10 > th dose independent rect. 22 13
656 73.19 temperature 15.0 720 > th dose independent rect. 3 14
660 73.20 wind 1.0 10 > th dose independent no NA NA
675 73.25 humidity 90.0 10 > th dose independent rect. 11 16
695 73.31 wind 1.0 10 < th dose independent rect. 2 6
717 73.38 atmosphere 1015.0 720 < th dose independent rect. 3 6
721 73.38 atmosphere 1005.0 30 > th dose dependent rect. 6 1
723 73.39 wind 3.0 30 < th dose dependent rect. 6 1
732 73.43 radiation 40.0 720 < th dose independent rect. 15 16
733 73.43 wind 1.0 10 > th dose independent rect. 21 23
734 73.44 temperature 25.0 720 > th dose independent rect. 19 8
737 73.45 temperature 15.0 720 > th dose independent rect. 21 12
743 73.47 precipitation 0.1 720 < th dose independent rect. 3 23
744 73.47 precipitation 0.1 720 < th dose dependent rect. 3 23
746 73.48 temperature 15.0 720 > th dose independent rect. 17 16
749 73.48 precipitation 0.1 720 > th dose dependent rect. 6 8
759 73.51 precipitation 0.1 720 > th dose independent rect. 6 8
764 73.52 humidity 90.0 720 < th dose independent rect. 7 8
769 73.53 temperature 15.0 720 > th dose independent rect. 3 21
770 73.53 temperature 15.0 720 > th dose independent rect. 18 21
774 73.54 humidity 80.0 10 > th dose independent rect. 2 11
780 73.55 temperature 15.0 720 > th dose independent rect. 21 22
787 73.57 wind 1.0 30 < th dose dependent rect. 22 5
789 73.58 atmosphere 1015.0 720 < th dose independent rect. 23 16
792 73.58 atmosphere 995.0 720 > th dose dependent rect. 2 1
800 73.60 temperature 15.0 720 > th dose independent rect. 21 8
802 73.60 temperature 15.0 1440 > th dose independent rect. 23 10
820 73.62 atmosphere 1010.0 30 < th dose independent rect. 8 18
821 73.62 temperature 25.0 720 > th dose dependent rect. 20 1
866 73.65 wind 9.0 720 < th dose independent rect. 15 16
870 73.66 temperature 15.0 1440 > th dose independent rect. 23 6
872 73.66 atmosphere 995.0 720 > th dose independent rect. 15 8
876 73.67 precipitation 0.1 1440 < th dose independent rect. 9 1
880 73.67 temperature 15.0 1440 > th dose independent rect. 23 12
884 73.67 wind 5.0 720 < th dose dependent rect. 2 1
885 73.67 precipitation 0.1 1440 < th dose dependent rect. 9 1
889 73.69 atmosphere 995.0 720 > th dose independent rect. 23 16
896 73.69 temperature 25.0 720 > th dose dependent rect. 19 7
897 73.69 temperature 20.0 270 < th dose dependent rect. 7 14
898 73.70 temperature 20.0 1440 < th dose independent rect. 10 1
907 73.70 temperature 10.0 720 > th dose independent rect. 15 8
910 73.70 temperature 15.0 4320 < th dose dependent rect. 10 1
914 73.70 temperature 25.0 720 > th dose dependent rect. 19 3
915 73.70 temperature 10.0 720 > th dose dependent rect. 7 8
929 73.71 humidity 90.0 720 > th dose dependent rect. 10 4
947 73.73 humidity 90.0 720 > th dose independent rect. 10 4
950 73.73 temperature 15.0 1440 > th dose independent rect. 23 14
957 73.73 temperature 20.0 720 < th dose dependent rect. 8 6
967 73.74 temperature 15.0 4320 > th dose independent rect. 3 8
970 73.74 temperature 15.0 720 > th dose independent rect. 12 22
971 73.75 wind 1.0 10 < th dose independent sin 16 NA
973 73.75 temperature 15.0 720 > th dose independent sin 2 NA
975 73.75 humidity 90.0 10 > th dose independent rect. 24 3
1000 73.76 atmosphere 995.0 720 > th dose independent rect. 11 16