Os07g0109600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Leo1-like protein family protein.
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Os07g0109600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Leo1-like protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 153.55 | 0.582 | 6.86 | 0.917 | 0.479 | -0.722 | 0.0228 | 0.143 | -0.0255 | 9.63 | 1014 | 4755 | -- | -- |
| 153.5 | 0.577 | 6.86 | 0.934 | 0.48 | -0.732 | 0.0221 | -- | -0.0163 | 9.61 | 1013 | 4780 | -- | -- |
| 153.55 | 0.577 | 6.86 | 0.917 | 0.479 | -0.722 | -- | 0.144 | -0.0254 | 9.63 | 1014 | 4755 | -- | -- |
| 153.46 | 0.577 | 6.86 | 0.924 | 0.487 | -0.729 | -- | -- | -0.0153 | 9.61 | 1013 | 4837 | -- | -- |
| 167.11 | 0.602 | 6.87 | 0.954 | -- | -0.709 | -- | 0.0881 | -0.0108 | -- | 1013 | 4943 | -- | -- |
| 169.47 | 0.61 | 6.9 | 0.714 | 0.471 | -- | 0.0286 | -- | -0.164 | 9.78 | -- | -- | -- | -- |
| 169.48 | 0.61 | 6.9 | 0.715 | 0.471 | -- | -- | -- | -0.164 | 9.78 | -- | -- | -- | -- |
| 166.77 | 0.601 | 6.87 | 0.967 | -- | -0.813 | -- | -- | -0.0113 | -- | 1013 | 5172 | -- | -- |
| 169.97 | 0.607 | 6.89 | -- | 0.487 | -0.634 | -- | -- | -0.151 | 9.64 | 1014 | 4475 | -- | -- |
| 182.68 | 0.632 | 6.91 | 0.71 | -- | -- | -- | -- | -0.164 | -- | -- | -- | -- | -- |
| 182.96 | 0.633 | 6.91 | -- | 0.469 | -- | -- | -- | -0.244 | 9.67 | -- | -- | -- | -- |
| 183.55 | 0.631 | 6.91 | -- | -- | -0.667 | -- | -- | -0.162 | -- | 1014 | 4120 | -- | -- |
| 196 | 0.653 | 6.93 | -- | -- | -- | -- | -- | -0.243 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 2 | 146.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 3 | 146.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 4 | 146.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 5 | 146.69 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 6 | 146.92 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 11 | 3 |
| 9 | 147.41 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 18 | 20 |
| 11 | 147.49 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 8 | 6 |
| 26 | 147.60 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 47 | 147.93 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 59 | 148.21 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 6 | NA |
| 85 | 148.52 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 103 | 148.64 | wind | 1.0 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 106 | 148.66 | wind | 1.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 119 | 148.87 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 7 |
| 120 | 148.90 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 121 | 148.98 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 125 | 149.02 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 129 | 149.06 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 153 | 149.34 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 155 | 149.36 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 8 | 12 |
| 168 | 149.37 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 182 | 149.41 | humidity | 60.0 | 14400 | < th | dose dependent | no | NA | NA |
| 289 | 149.67 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 322 | 149.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 323 | 149.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 331 | 149.88 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 332 | 149.88 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 359 | 150.08 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 374 | 150.25 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 11 | 22 |
| 380 | 150.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 381 | 150.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 383 | 150.35 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 385 | 150.37 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 8 | 4 |
| 387 | 150.39 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 388 | 150.39 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 11 | 10 |
| 389 | 150.39 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 11 | 13 |
| 390 | 150.39 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 23 |
| 405 | 150.42 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 409 | 150.44 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 410 | 150.44 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 9 |
| 411 | 150.44 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 11 |
| 415 | 150.47 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 10 |
| 434 | 150.50 | humidity | 50.0 | 14400 | > th | dose independent | sin | 21 | NA |
| 435 | 150.50 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 19 | 17 |
| 440 | 150.51 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 7 | 17 |
| 452 | 150.52 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 471 | 150.52 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 23 | 21 |
| 476 | 150.52 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 478 | 150.53 | humidity | 50.0 | 14400 | > th | dose independent | no | NA | NA |
| 608 | 150.62 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 622 | 150.66 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 634 | 150.67 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 637 | 150.68 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 10 |
| 698 | 150.81 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 704 | 150.82 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 730 | 150.89 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 785 | 151.11 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 798 | 151.17 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 807 | 151.22 | humidity | 60.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 819 | 151.28 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 859 | 151.41 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 15 |
| 884 | 151.46 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 893 | 151.51 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 913 | 151.57 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 7 |
| 939 | 151.70 | wind | 1.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 955 | 151.76 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 23 |