Os07g0109100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF594 family protein.
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Os07g0109100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF594 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.37 | 0.255 | 3 | -0.000408 | 0.0469 | 8.92 | -0.16 | -33 | 0.00028 | 6.11 | 1.501 | 59 | -- | -- |
| 30.12 | 0.256 | 2.98 | 0.0879 | 0.0478 | 1.49 | -0.155 | -- | 0.00927 | 5.05 | 1.5 | 155 | -- | -- |
| 29.43 | 0.253 | 3 | 0.00151 | 0.047 | 8.96 | -- | -33.1 | 0.00106 | 6.69 | 1.503 | 59 | -- | -- |
| 30.12 | 0.256 | 2.98 | 0.0976 | 0.0508 | 1.44 | -- | -- | 0.00295 | 6.9 | 1.5 | 148 | -- | -- |
| 29.54 | 0.253 | 3 | 0.00219 | -- | 8.99 | -- | -33.4 | 0.00198 | -- | 1.501 | 59 | -- | -- |
| 32.45 | 0.267 | 2.98 | 0.119 | 0.0303 | -- | -0.234 | -- | -0.00296 | 5.9 | -- | -- | -- | -- |
| 32.58 | 0.267 | 2.98 | 0.118 | 0.0305 | -- | -- | -- | -0.00193 | 7.07 | -- | -- | -- | -- |
| 30.25 | 0.256 | 2.98 | 0.102 | -- | 1.42 | -- | -- | 0.00241 | -- | 1.5 | 140 | -- | -- |
| 30.38 | 0.257 | 2.98 | -- | 0.0519 | 1.47 | -- | -- | -0.00978 | 6.71 | 1.5 | 155 | -- | -- |
| 32.63 | 0.267 | 2.98 | 0.118 | -- | -- | -- | -- | -0.00138 | -- | -- | -- | -- | -- |
| 32.95 | 0.269 | 2.98 | -- | 0.0318 | -- | -- | -- | -0.015 | 6.84 | -- | -- | -- | -- |
| 30.53 | 0.257 | 2.98 | -- | -- | 1.44 | -- | -- | -0.00864 | -- | 1.5 | 150 | -- | -- |
| 33 | 0.268 | 2.98 | -- | -- | -- | -- | -- | -0.0145 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.71 | humidity | 7e+01 | 30 | < th | dose independent | rect. | 19 | 1 |
| 24 | 27.99 | humidity | 7e+01 | 30 | < th | dose dependent | rect. | 19 | 1 |
| 86 | 28.92 | temperature | 3e+01 | 90 | > th | dose independent | rect. | 18 | 1 |
| 102 | 29.03 | temperature | 3e+01 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 116 | 29.23 | precipitation | 1e-01 | 30 | > th | dose independent | rect. | 13 | 5 |
| 128 | 29.23 | precipitation | 1e-01 | 30 | > th | dose dependent | rect. | 13 | 5 |
| 140 | 29.30 | precipitation | 1e-01 | 90 | > th | dose dependent | rect. | 16 | 3 |
| 141 | 29.32 | precipitation | 1e-01 | 90 | > th | dose independent | rect. | 16 | 3 |
| 144 | 29.33 | precipitation | 1e-01 | 90 | > th | dose independent | rect. | 16 | 1 |
| 147 | 29.36 | atmosphere | 1e+03 | 90 | < th | dose independent | rect. | 16 | 1 |
| 158 | 29.38 | precipitation | 1e-01 | 10 | > th | dose independent | rect. | 17 | 1 |
| 186 | 29.38 | precipitation | 1e-01 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 231 | 29.46 | atmosphere | 1e+03 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 327 | 29.81 | precipitation | 1e-01 | 90 | > th | dose dependent | sin | 21 | NA |
| 467 | 29.92 | precipitation | 1e-01 | 10 | > th | dose independent | sin | 20 | NA |
| 468 | 29.92 | precipitation | 1e-01 | 10 | < th | dose independent | sin | 20 | NA |
| 472 | 29.92 | precipitation | 1e-01 | 10 | > th | dose dependent | sin | 20 | NA |
| 473 | 29.92 | precipitation | 1e-01 | 10 | < th | dose dependent | sin | 20 | NA |
| 781 | 30.52 | precipitation | 1e-01 | 90 | < th | dose independent | sin | 21 | NA |
| 782 | 30.52 | precipitation | 1e-01 | 90 | < th | dose dependent | sin | 21 | NA |
| 786 | 30.53 | precipitation | 1e-01 | 90 | > th | dose independent | sin | 21 | NA |
| 802 | 30.56 | atmosphere | 1e+03 | 270 | < th | dose independent | rect. | 14 | 3 |
| 830 | 30.59 | humidity | 7e+01 | 270 | > th | dose independent | rect. | 18 | 11 |
| 877 | 30.62 | precipitation | 1e-01 | 90 | > th | dose dependent | no | NA | NA |
| 883 | 30.62 | precipitation | 1e-01 | 90 | > th | dose dependent | rect. | 13 | 22 |