Os07g0107800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phytosulfokine receptor precursor (EC 2.7.1.37) (Phytosulfokine LRR receptor kinase).
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Os07g0107800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phytosulfokine receptor precursor (EC 2.7.1.37) (Phytosulfokine LRR receptor kinase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.44 | 0.34 | 7.92 | 0.251 | 1.36 | -0.38 | -0.146 | -2.3 | -0.119 | 7.03 | 25.65 | 9 | -- | -- |
| 61.11 | 0.367 | 7.96 | -0.124 | 1.38 | -0.392 | -0.0604 | -- | -0.199 | 6.97 | 40.26 | 9 | -- | -- |
| 52.49 | 0.337 | 7.92 | 0.251 | 1.36 | -0.38 | -- | -2.3 | -0.119 | 7.02 | 25.7 | 8 | -- | -- |
| 61.1 | 0.364 | 7.96 | -0.127 | 1.38 | -0.393 | -- | -- | -0.2 | 6.98 | 43.74 | 9 | -- | -- |
| 148.16 | 0.57 | 7.95 | 0.214 | -- | -0.51 | -- | -2.39 | -0.103 | -- | 23.78 | 8 | -- | -- |
| 62.56 | 0.371 | 7.95 | -0.0498 | 1.35 | -- | -0.0378 | -- | -0.145 | 7.27 | -- | -- | -- | -- |
| 62.56 | 0.37 | 7.95 | -0.0506 | 1.35 | -- | -- | -- | -0.145 | 7.27 | -- | -- | -- | -- |
| 157.76 | 0.588 | 7.99 | -0.0859 | -- | -0.275 | -- | -- | -0.163 | -- | 23.78 | 8 | -- | -- |
| 61.49 | 0.365 | 7.96 | -- | 1.38 | -0.33 | -- | -- | -0.179 | 7.03 | 51.98 | 9 | -- | -- |
| 158.93 | 0.589 | 7.98 | -0.027 | -- | -- | -- | -- | -0.122 | -- | -- | -- | -- | -- |
| 62.63 | 0.37 | 7.95 | -- | 1.35 | -- | -- | -- | -0.139 | 7.28 | -- | -- | -- | -- |
| 157.94 | 0.587 | 7.99 | -- | -- | -0.246 | -- | -- | -0.15 | -- | 23.78 | 8 | -- | -- |
| 158.94 | 0.588 | 7.98 | -- | -- | -- | -- | -- | -0.119 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.44 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 3 |
| 5 | 48.70 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 7 | 48.76 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 12 | 49.08 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 14 | 49.15 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 13 |
| 16 | 49.18 | wind | 7 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 17 | 49.24 | wind | 7 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 19 | 49.26 | wind | 7 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 20 | 49.27 | temperature | 20 | 270 | > th | dose independent | rect. | 2 | 22 |
| 26 | 49.37 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 20 |
| 27 | 49.38 | wind | 7 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 30 | 49.44 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 37 | 49.47 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 20 | 9 |
| 38 | 49.47 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 20 | 18 |
| 51 | 49.54 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 68 | 49.60 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 75 | 49.62 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 3 | 10 |
| 80 | 49.63 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 21 | 16 |
| 82 | 49.63 | wind | 7 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 98 | 49.67 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 115 | 49.70 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 132 | 49.73 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 9 | NA |
| 178 | 49.80 | temperature | 20 | 720 | < th | dose independent | sin | 21 | NA |
| 196 | 49.84 | atmosphere | 1005 | 14400 | > th | dose independent | sin | 7 | NA |
| 200 | 49.84 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 3 | 11 |
| 254 | 49.92 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 255 | 49.92 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 3 | 2 |
| 261 | 49.93 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 269 | 49.94 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 286 | 49.96 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 292 | 49.97 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 385 | 50.07 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 388 | 50.08 | atmosphere | 1005 | 14400 | < th | dose independent | no | NA | NA |
| 407 | 50.09 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 3 | 22 |
| 441 | 50.13 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 457 | 50.13 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 603 | 50.27 | temperature | 20 | 720 | < th | dose independent | rect. | 17 | 4 |
| 717 | 50.40 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 8 | 23 |
| 718 | 50.41 | atmosphere | 1005 | 14400 | > th | dose independent | no | NA | NA |
| 726 | 50.41 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 753 | 50.45 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 760 | 50.46 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 770 | 50.46 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 772 | 50.46 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 935 | 50.64 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 10 | 10 |
| 956 | 50.67 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 968 | 50.68 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 987 | 50.71 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 8 |