Os07g0106200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Hexose transporter.
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Os07g0106200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Hexose transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 244.17 | 0.734 | 11.7 | 4.64 | 1.96 | -1.79 | 0.485 | 1.82 | 1.44 | 23.1 | 25.3 | 1260 | -- | -- |
| 245.19 | 0.729 | 11.7 | 4.17 | 1.93 | -1.59 | 0.528 | -- | 1.32 | 23.1 | 25.4 | 1276 | -- | -- |
| 245.14 | 0.729 | 11.7 | 4.67 | 1.94 | -1.79 | -- | 2.01 | 1.45 | 23.2 | 25.3 | 1274 | -- | -- |
| 246.4 | 0.731 | 11.7 | 4.15 | 1.92 | -1.55 | -- | -- | 1.32 | 23.2 | 25.39 | 1308 | -- | -- |
| 437.67 | 0.98 | 11.7 | 4.17 | -- | -2.08 | -- | 2.18 | 1.35 | -- | 25.3 | 1274 | -- | -- |
| 340.53 | 0.865 | 11.8 | 3.66 | 1.73 | -- | 0.38 | -- | 1.17 | 22.8 | -- | -- | -- | -- |
| 341.12 | 0.865 | 11.8 | 3.65 | 1.73 | -- | -- | -- | 1.17 | 22.8 | -- | -- | -- | -- |
| 439.66 | 0.981 | 11.7 | 3.93 | -- | -1.92 | -- | -- | 1.29 | -- | 25.3 | 1274 | -- | -- |
| 662.5 | 1.2 | 11.9 | -- | 1.87 | -0.802 | -- | -- | 0.659 | 23 | 33.82 | 1056 | -- | -- |
| 526.43 | 1.07 | 11.7 | 3.68 | -- | -- | -- | -- | 1.18 | -- | -- | -- | -- | -- |
| 691.3 | 1.23 | 11.8 | -- | 1.76 | -- | -- | -- | 0.761 | 22.9 | -- | -- | -- | -- |
| 840.02 | 1.35 | 11.8 | -- | -- | -1.35 | -- | -- | 0.826 | -- | 25.3 | 1274 | -- | -- |
| 883.75 | 1.39 | 11.8 | -- | -- | -- | -- | -- | 0.769 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 239.62 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 10 | 241.05 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 19 | 241.64 | humidity | 50 | 1440 | > th | dose dependent | sin | 20 | NA |
| 49 | 243.02 | humidity | 90 | 1440 | < th | dose dependent | sin | 20 | NA |
| 78 | 243.56 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 97 | 244.04 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 102 | 244.15 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 11 |
| 107 | 244.21 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 117 | 244.34 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 118 | 244.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 8 |
| 147 | 244.75 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 13 |
| 155 | 244.82 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 159 | 244.84 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 199 | 245.16 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 205 | 245.20 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 207 | 245.20 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 226 | 245.29 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 345 | 245.94 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 402 | 246.19 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 416 | 246.23 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 433 | 246.29 | humidity | 80 | 1440 | < th | dose independent | sin | 0 | NA |
| 441 | 246.33 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 448 | 246.34 | temperature | 25 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 506 | 246.56 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 580 | 246.86 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 623 | 247.08 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 666 | 247.27 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 704 | 247.41 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 714 | 247.45 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 746 | 247.56 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 766 | 247.64 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 778 | 247.68 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 791 | 247.74 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 793 | 247.75 | humidity | 80 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 805 | 247.81 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 818 | 247.90 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 839 | 247.99 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 843 | 248.02 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 938 | 248.59 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 954 | 248.70 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 23 |