Os07g0105300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0105300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 102.93 | 0.477 | 2.96 | 0.139 | 0.475 | -0.392 | -2.99 | 2.76 | 0.0931 | 13.1 | 0.17 | 256 | -- | -- |
| 107.2 | 0.486 | 2.99 | -0.0406 | 0.266 | -0.155 | -0.162 | -- | 0.038 | 10.7 | 0.17 | 256 | -- | -- |
| 107.29 | 0.486 | 2.99 | -0.0474 | 0.27 | -0.158 | -- | -0.0448 | 0.0374 | 10.9 | 0.17 | 256 | -- | -- |
| 106.84 | 0.481 | 2.98 | -0.0442 | 0.262 | -0.148 | -- | -- | 0.033 | 11.2 | 0.1788 | 177 | -- | -- |
| 108.32 | 0.485 | 2.99 | -0.0519 | -- | 0.0186 | -- | 0.138 | 0.0423 | -- | 3.39 | 325 | -- | -- |
| 107.74 | 0.487 | 2.99 | -0.0505 | 0.0951 | -- | -0.27 | -- | 0.0372 | 8.63 | -- | -- | -- | -- |
| 107.95 | 0.487 | 2.99 | -0.0585 | 0.0957 | -- | -- | -- | 0.0376 | 9.37 | -- | -- | -- | -- |
| 108.16 | 0.486 | 2.99 | -0.0552 | -- | 0.0547 | -- | -- | 0.0403 | -- | 5.76 | 125 | -- | -- |
| 106.62 | 0.481 | 2.99 | -- | 0.256 | -0.163 | -- | -- | 0.0577 | 12.2 | 0.17 | 193 | -- | -- |
| 108.49 | 0.487 | 2.99 | -0.059 | -- | -- | -- | -- | 0.038 | -- | -- | -- | -- | -- |
| 108.04 | 0.486 | 2.99 | -- | 0.0958 | -- | -- | -- | 0.0441 | 9.42 | -- | -- | -- | -- |
| 107.63 | 0.483 | 2.99 | -- | -- | 0.127 | -- | -- | 0.0396 | -- | 21.08 | 69 | -- | -- |
| 108.58 | 0.486 | 2.99 | -- | -- | -- | -- | -- | 0.0445 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.23 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 2 | 88.23 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 20 | 95.46 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 7 |
| 21 | 95.46 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 7 |
| 90 | 97.99 | wind | 7.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 108 | 98.39 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 117 | 98.48 | humidity | 90.0 | 270 | > th | dose independent | rect. | 11 | 2 |
| 124 | 98.56 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 8 | 3 |
| 141 | 98.73 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 10 |
| 150 | 98.86 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 151 | 98.86 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 177 | 99.01 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 6 | 1 |
| 205 | 99.18 | wind | 7.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 221 | 99.41 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 228 | 99.44 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 231 | 99.46 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 241 | 99.48 | humidity | 80.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 252 | 99.51 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 255 | 99.53 | wind | 3.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 262 | 99.56 | temperature | 25.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 266 | 99.57 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 270 | 99.58 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 275 | 99.60 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 278 | 99.60 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 281 | 99.60 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 282 | 99.60 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 284 | 99.60 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 289 | 99.60 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 293 | 99.60 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 294 | 99.60 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 299 | 99.60 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 302 | 99.61 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 303 | 99.61 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 305 | 99.62 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 306 | 99.62 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 350 | 99.68 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 361 | 99.75 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 383 | 99.90 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 396 | 100.04 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 399 | 100.06 | temperature | 25.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 463 | 100.69 | radiation | 1.0 | 720 | > th | dose independent | rect. | 4 | 1 |
| 473 | 100.69 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 513 | 101.04 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 514 | 101.04 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 547 | 101.32 | humidity | 80.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 643 | 101.86 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 671 | 101.98 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 680 | 102.01 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 731 | 102.20 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 732 | 102.20 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 735 | 102.20 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 739 | 102.20 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 748 | 102.20 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 749 | 102.20 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 771 | 102.20 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 842 | 102.37 | atmosphere | 1000.0 | 30 | > th | dose independent | sin | 5 | NA |
| 843 | 102.37 | atmosphere | 1000.0 | 30 | < th | dose independent | sin | 5 | NA |
| 849 | 102.38 | wind | 7.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 852 | 102.38 | atmosphere | 1000.0 | 720 | < th | dose dependent | rect. | 22 | 3 |
| 868 | 102.43 | radiation | 1.0 | 270 | < th | dose independent | rect. | 11 | 21 |
| 876 | 102.45 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 11 |
| 883 | 102.51 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 898 | 102.55 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 14 |
| 903 | 102.56 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 907 | 102.57 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 910 | 102.59 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 2 | 14 |
| 915 | 102.61 | temperature | 25.0 | 10 | < th | dose independent | rect. | 2 | 15 |
| 949 | 102.72 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 18 | 23 |
| 957 | 102.74 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 12 | 15 |
| 960 | 102.75 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 4 |
| 979 | 102.77 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 996 | 102.81 | radiation | 1.0 | 270 | < th | dose independent | rect. | 20 | 23 |