Os07g0104100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxidase 27 precursor (EC 1.11.1.7) (Atperox P27) (PRXR7) (ATP12a).
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Os07g0104100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peroxidase 27 precursor (EC 1.11.1.7) (Atperox P27) (PRXR7) (ATP12a).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.77 | 0.618 | 2.84 | 0.0819 | 0.186 | 2.24 | -0.275 | 4.22 | -0.125 | 19.5 | 18.7 | 770 | -- | -- |
| 180.97 | 0.627 | 2.8 | 0.186 | 0.164 | 0.689 | -0.411 | -- | -0.086 | 19 | 20.3 | 1008 | -- | -- |
| 170.87 | 0.609 | 2.84 | 0.0695 | 0.126 | 3.52 | -- | 6.91 | -0.146 | 17.3 | 17.2 | 608 | -- | -- |
| 181.28 | 0.627 | 2.8 | 0.205 | 0.174 | 0.669 | -- | -- | -0.0921 | 18.5 | 20.5 | 1029 | -- | -- |
| 171.9 | 0.611 | 2.85 | 0.116 | -- | 3.83 | -- | 7.51 | -0.156 | -- | 17.1 | 607 | -- | -- |
| 184.68 | 0.637 | 2.81 | 0.044 | 0.173 | -- | -0.312 | -- | -0.158 | 18.6 | -- | -- | -- | -- |
| 184.76 | 0.637 | 2.81 | 0.0505 | 0.181 | -- | -- | -- | -0.158 | 17.5 | -- | -- | -- | -- |
| 182.86 | 0.63 | 2.8 | 0.202 | -- | 0.68 | -- | -- | -0.0963 | -- | 20.41 | 1040 | -- | -- |
| 182.22 | 0.629 | 2.81 | -- | 0.173 | 0.541 | -- | -- | -0.127 | 18.3 | 20.38 | 1014 | -- | -- |
| 186.47 | 0.638 | 2.81 | 0.0445 | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
| 184.83 | 0.636 | 2.81 | -- | 0.181 | -- | -- | -- | -0.163 | 17.5 | -- | -- | -- | -- |
| 183.77 | 0.631 | 2.8 | -- | -- | 0.55 | -- | -- | -0.129 | -- | 20.33 | 1030 | -- | -- |
| 186.53 | 0.637 | 2.81 | -- | -- | -- | -- | -- | -0.167 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 167.59 | wind | 5 | 90 | > th | dose independent | rect. | 12 | 2 |
| 2 | 167.81 | wind | 5 | 90 | > th | dose dependent | rect. | 12 | 2 |
| 5 | 169.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 6 | 169.23 | wind | 1 | 10 | < th | dose independent | rect. | 22 | 1 |
| 8 | 169.23 | wind | 1 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 11 | 169.31 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 13 | 169.39 | wind | 9 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 45 | 169.39 | wind | 9 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 79 | 169.51 | temperature | 20 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 81 | 169.59 | humidity | 80 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 82 | 169.66 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 84 | 169.68 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 86 | 169.79 | humidity | 80 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 88 | 169.88 | temperature | 20 | 1440 | < th | dose dependent | rect. | 19 | 2 |
| 90 | 169.97 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 6 |
| 97 | 170.06 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 6 |
| 98 | 170.09 | wind | 5 | 10 | > th | dose independent | rect. | 13 | 1 |
| 99 | 170.09 | temperature | 20 | 1440 | < th | dose dependent | rect. | 12 | 9 |
| 102 | 170.13 | temperature | 20 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 103 | 170.13 | temperature | 20 | 1440 | < th | dose dependent | rect. | 14 | 7 |
| 123 | 170.29 | wind | 1 | 10 | < th | dose dependent | rect. | 14 | 9 |
| 125 | 170.35 | wind | 1 | 10 | < th | dose dependent | rect. | 17 | 6 |
| 129 | 170.38 | humidity | 90 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 166 | 171.01 | temperature | 20 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 176 | 171.27 | wind | 1 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 188 | 171.50 | wind | 9 | 4320 | < th | dose independent | rect. | 22 | 12 |
| 191 | 171.58 | wind | 9 | 4320 | > th | dose independent | rect. | 22 | 12 |
| 220 | 172.14 | wind | 9 | 4320 | > th | dose independent | rect. | 23 | 9 |
| 224 | 172.16 | wind | 9 | 4320 | > th | dose dependent | rect. | 23 | 9 |
| 233 | 172.26 | wind | 9 | 4320 | > th | dose dependent | rect. | 22 | 12 |
| 240 | 172.47 | temperature | 20 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 261 | 172.76 | temperature | 20 | 720 | < th | dose dependent | rect. | 7 | 5 |
| 262 | 172.76 | wind | 1 | 720 | < th | dose dependent | rect. | 7 | 6 |
| 264 | 172.83 | wind | 9 | 4320 | < th | dose independent | rect. | 22 | 9 |
| 273 | 172.95 | wind | 1 | 720 | < th | dose independent | rect. | 7 | 1 |
| 276 | 173.03 | wind | 1 | 720 | < th | dose independent | rect. | 6 | 3 |
| 280 | 173.08 | wind | 5 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 290 | 173.27 | humidity | 90 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 294 | 173.30 | wind | 1 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 301 | 173.45 | temperature | 25 | 270 | < th | dose independent | rect. | 10 | 1 |
| 303 | 173.48 | wind | 1 | 270 | < th | dose dependent | rect. | 7 | 12 |
| 324 | 173.68 | temperature | 20 | 1440 | < th | dose dependent | sin | 20 | NA |
| 335 | 173.77 | wind | 1 | 720 | < th | dose independent | rect. | 6 | 7 |
| 366 | 173.96 | atmosphere | 995 | 10 | > th | dose independent | sin | 8 | NA |
| 369 | 173.97 | temperature | 20 | 720 | < th | dose dependent | rect. | 2 | 10 |
| 376 | 174.02 | wind | 5 | 4320 | > th | dose dependent | rect. | 3 | 5 |
| 394 | 174.11 | wind | 5 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 419 | 174.19 | temperature | 20 | 720 | < th | dose dependent | rect. | 2 | 3 |
| 421 | 174.20 | wind | 7 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 432 | 174.22 | temperature | 20 | 720 | < th | dose dependent | rect. | 3 | 1 |
| 444 | 174.26 | wind | 7 | 4320 | < th | dose independent | rect. | 2 | 7 |
| 454 | 174.29 | wind | 7 | 4320 | < th | dose independent | rect. | 2 | 5 |
| 476 | 174.34 | wind | 5 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 518 | 174.41 | temperature | 20 | 720 | < th | dose dependent | sin | 2 | NA |
| 596 | 174.54 | temperature | 25 | 270 | < th | dose independent | rect. | 10 | 3 |
| 597 | 174.54 | atmosphere | 1000 | 30 | < th | dose dependent | rect. | 16 | 2 |
| 625 | 174.59 | wind | 9 | 4320 | < th | dose independent | sin | 10 | NA |
| 633 | 174.61 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 16 | 3 |
| 638 | 174.63 | wind | 9 | 4320 | > th | dose dependent | sin | 9 | NA |
| 764 | 174.90 | wind | 3 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 775 | 174.93 | wind | 1 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 781 | 174.94 | wind | 9 | 4320 | > th | dose independent | sin | 9 | NA |
| 782 | 174.94 | wind | 9 | 4320 | < th | dose independent | rect. | 19 | 15 |
| 792 | 174.97 | wind | 7 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 864 | 175.15 | atmosphere | 1000 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 865 | 175.15 | wind | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 869 | 175.16 | temperature | 30 | 10 | > th | dose independent | rect. | 17 | 1 |
| 894 | 175.17 | atmosphere | 995 | 10 | < th | dose independent | sin | 8 | NA |