Os07g0103200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0103200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.33 | 0.165 | 11.8 | -0.0845 | 0.314 | 0.317 | 0.142 | 0.273 | 0.112 | 1.26 | 70 | 1310 | -- | -- |
| 12.41 | 0.164 | 11.7 | -0.0555 | 0.341 | 0.332 | 0.0979 | -- | 0.118 | 1.13 | 69.8 | 1223 | -- | -- |
| 12.39 | 0.164 | 11.8 | -0.0846 | 0.325 | 0.32 | -- | 0.211 | 0.113 | 1.21 | 70 | 1244 | -- | -- |
| 12.45 | 0.164 | 11.7 | -0.0519 | 0.342 | 0.341 | -- | -- | 0.119 | 1.14 | 69.79 | 1223 | -- | -- |
| 16.61 | 0.19 | 11.7 | -0.0969 | -- | 0.346 | -- | 0.173 | 0.153 | -- | 70.06 | 3085 | -- | -- |
| 16.64 | 0.191 | 11.8 | -0.123 | 0.259 | -- | 0.0399 | -- | 0.0953 | 1.18 | -- | -- | -- | -- |
| 16.65 | 0.191 | 11.8 | -0.125 | 0.259 | -- | -- | -- | 0.095 | 1.19 | -- | -- | -- | -- |
| 15.8 | 0.185 | 11.7 | -0.0529 | -- | 0.412 | -- | -- | 0.152 | -- | 71.83 | 1664 | -- | -- |
| 12.52 | 0.165 | 11.7 | -- | 0.34 | 0.349 | -- | -- | 0.125 | 1.1 | 70 | 1223 | -- | -- |
| 20.8 | 0.213 | 11.7 | -0.115 | -- | -- | -- | -- | 0.1 | -- | -- | -- | -- | -- |
| 17.06 | 0.193 | 11.7 | -- | 0.257 | -- | -- | -- | 0.109 | 1.17 | -- | -- | -- | -- |
| 15.81 | 0.185 | 11.7 | -- | -- | 0.422 | -- | -- | 0.154 | -- | 71 | 1639 | -- | -- |
| 21.15 | 0.215 | 11.7 | -- | -- | -- | -- | -- | 0.113 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 12.01 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 2 | 12.04 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 3 | 12.11 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 11 | 12.18 | humidity | 70 | 1440 | < th | dose independent | rect. | 19 | 18 |
| 14 | 12.20 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 44 | 12.38 | humidity | 70 | 1440 | > th | dose independent | rect. | 21 | 16 |
| 101 | 12.45 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 102 | 12.45 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 126 | 12.46 | humidity | 70 | 1440 | > th | dose independent | sin | 3 | NA |
| 150 | 12.49 | humidity | 70 | 1440 | < th | dose independent | sin | 2 | NA |
| 164 | 12.50 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 252 | 12.51 | humidity | 70 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 254 | 12.52 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 325 | 12.57 | humidity | 70 | 1440 | > th | dose independent | sin | 8 | NA |
| 482 | 12.73 | humidity | 80 | 1440 | < th | dose dependent | rect. | 17 | 20 |
| 529 | 12.76 | humidity | 60 | 1440 | > th | dose dependent | rect. | 9 | 4 |
| 539 | 12.79 | humidity | 60 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 581 | 12.85 | humidity | 80 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 586 | 12.86 | humidity | 80 | 1440 | < th | dose dependent | sin | 4 | NA |
| 588 | 12.86 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 7 |
| 643 | 12.93 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 646 | 12.93 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 14 |
| 861 | 13.01 | radiation | 10 | 4320 | < th | dose dependent | rect. | 7 | 3 |
| 875 | 13.02 | humidity | 50 | 1440 | > th | dose dependent | sin | 2 | NA |
| 926 | 13.06 | radiation | 10 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 930 | 13.06 | humidity | 80 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 962 | 13.08 | radiation | 10 | 4320 | < th | dose dependent | rect. | 9 | 1 |