Os07g0103000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os07g0103000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 102.09 | 0.475 | 8.09 | -2.06 | 1.35 | -1.66 | 2.21 | 2.24 | -5.5 | 2.44 | 23.79 | 559 | 0.425 | -- |
| 113.88 | 0.497 | 8.03 | -1.54 | 1.41 | -1.57 | 1.14 | -- | -5.33 | 2.13 | 23.3 | 614 | 0.818 | -- |
| 113.99 | 0.497 | 8.06 | -1.88 | 1.46 | -1.56 | -- | 1.26 | -5.41 | 2.15 | 23.2 | 622 | 1.72 | -- |
| 117.98 | 0.506 | 8.05 | -1.57 | 1.4 | -1.54 | -- | -- | -5.37 | 1.99 | 23.24 | 705 | 1.69 | -- |
| 186.1 | 0.635 | 8.11 | -2.03 | -- | -2.27 | -- | 1.89 | -5.63 | -- | 24 | 826 | 0.902 | -- |
| 187.34 | 0.642 | 7.95 | -1.18 | 1.85 | -- | 0.601 | -- | -4.87 | 1.07 | -- | -- | -- | -- |
| 188.8 | 0.643 | 7.95 | -1.2 | 1.85 | -- | -- | -- | -4.87 | 1.01 | -- | -- | -- | -- |
| 185.17 | 0.634 | 8.09 | -1.8 | -- | -2.34 | -- | -- | -5.5 | -- | 24.1 | 787 | 0.0291 | -- |
| 179.95 | 0.625 | 7.99 | -- | 1.48 | -1.21 | -- | -- | -5.1 | 1.7 | 23.2 | 706 | 2.04 | -- |
| 402.08 | 0.937 | 7.92 | -1.13 | -- | -- | -- | -- | -4.84 | -- | -- | -- | -- | -- |
| 226.55 | 0.704 | 7.92 | -- | 1.83 | -- | -- | -- | -4.74 | 0.978 | -- | -- | -- | -- |
| 210.34 | 0.675 | 7.78 | -- | -- | -2.42 | -- | -- | -4.46 | -- | 30.5 | 1259 | 3.39 | -- |
| 435.59 | 0.974 | 7.89 | -- | -- | -- | -- | -- | -4.71 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.39 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 12 |
| 10 | 109.46 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 66 | 115.49 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 7 |
| 71 | 115.85 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 85 | 116.48 | temperature | 30 | 270 | < th | dose dependent | sin | 4 | NA |
| 89 | 116.63 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 93 | 116.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 3 |
| 99 | 117.23 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 108 | 117.41 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 5 |
| 123 | 118.16 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 192 | 120.97 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 210 | 121.58 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 259 | 122.97 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 261 | 123.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 311 | 124.26 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 7 |
| 312 | 124.27 | temperature | 25 | 270 | < th | dose independent | rect. | 5 | 9 |
| 409 | 126.44 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 9 |
| 450 | 127.09 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 9 |
| 459 | 127.24 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 2 |
| 525 | 128.25 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 575 | 128.69 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 582 | 128.74 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 590 | 128.79 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 593 | 128.81 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 653 | 129.58 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 6 |
| 788 | 131.03 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 797 | 131.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 814 | 131.23 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 819 | 131.26 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 826 | 131.29 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 850 | 131.43 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 854 | 131.43 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 858 | 131.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 911 | 131.79 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 913 | 131.80 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 930 | 131.90 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 935 | 131.94 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 938 | 131.95 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 7 |
| 951 | 132.02 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 3 |