Os07g0100900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Legume lectin, beta domain containing protein.
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Os07g0100900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Legume lectin, beta domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.24 | 0.468 | 8.49 | 1.68 | 0.74 | -0.123 | -0.38 | 8.09 | 0.0635 | 22.8 | 29.99 | 2539 | -- | -- |
| 106.27 | 0.48 | 8.81 | -0.184 | 0.878 | 0.888 | -0.187 | -- | -0.495 | 23.2 | 30.9 | 18762 | -- | -- |
| 99.84 | 0.465 | 8.49 | 1.69 | 0.741 | -0.125 | -- | 8.03 | 0.0611 | 22.8 | 30 | 2539 | -- | -- |
| 103.34 | 0.473 | 8.81 | 0.0462 | 0.801 | 0.868 | -- | -- | -0.52 | 23 | 31.6 | 18735 | -- | -- |
| 132.63 | 0.536 | 8.47 | 1.58 | -- | 0.0203 | -- | 8.23 | 0.0617 | -- | 30 | 2418 | -- | -- |
| 130.22 | 0.535 | 8.7 | 0.385 | 0.811 | -- | -0.131 | -- | -0.151 | 23.1 | -- | -- | -- | -- |
| 130.3 | 0.535 | 8.7 | 0.39 | 0.812 | -- | -- | -- | -0.15 | 23.2 | -- | -- | -- | -- |
| 129.51 | 0.53 | 8.65 | 0.134 | -- | 1.12 | -- | -- | -0.046 | -- | 29.6 | 1039 | -- | -- |
| 102.82 | 0.472 | 8.81 | -- | 0.826 | 0.956 | -- | -- | -0.596 | 22.9 | 31.6 | 18877 | -- | -- |
| 171.44 | 0.612 | 8.68 | 0.409 | -- | -- | -- | -- | -0.143 | -- | -- | -- | -- | -- |
| 134.3 | 0.542 | 8.71 | -- | 0.816 | -- | -- | -- | -0.194 | 23.2 | -- | -- | -- | -- |
| 128.96 | 0.529 | 8.68 | -- | -- | 1.11 | -- | -- | -0.155 | -- | 29.54 | 991 | -- | -- |
| 175.86 | 0.619 | 8.69 | -- | -- | -- | -- | -- | -0.189 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.73 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 2 | 99.89 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 3 | 100.36 | wind | 5.0 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 5 | 100.45 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 6 | 100.45 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 7 | 100.50 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 17 | 100.71 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 4 |
| 20 | 100.74 | wind | 5.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 27 | 100.80 | wind | 5.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 35 | 100.86 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 37 | 100.88 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 12 |
| 39 | 100.90 | wind | 5.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 47 | 100.96 | wind | 5.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 53 | 100.99 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 57 | 101.00 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 13 | 7 |
| 70 | 101.05 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 10 | 11 |
| 99 | 101.15 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 17 |
| 127 | 101.22 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 132 | 101.23 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 20 | NA |
| 158 | 101.28 | wind | 5.0 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 164 | 101.29 | wind | 5.0 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 168 | 101.29 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 234 | 101.37 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 9 |
| 258 | 101.39 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 281 | 101.41 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 319 | 101.46 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 320 | 101.46 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 324 | 101.47 | wind | 5.0 | 43200 | > th | dose dependent | sin | 9 | NA |
| 360 | 101.54 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |
| 371 | 101.54 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 14 |
| 457 | 101.55 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 12 |
| 461 | 101.56 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 17 |
| 479 | 101.58 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 489 | 101.59 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 494 | 101.60 | temperature | 30.0 | 1440 | > th | dose independent | sin | 21 | NA |
| 535 | 101.64 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 542 | 101.64 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 585 | 101.68 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 590 | 101.68 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 594 | 101.68 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 18 |
| 605 | 101.69 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 16 |
| 630 | 101.70 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 22 |
| 657 | 101.71 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 658 | 101.71 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 679 | 101.72 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 23 |
| 685 | 101.73 | temperature | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 697 | 101.73 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 713 | 101.74 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 19 |
| 762 | 101.79 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 16 |
| 772 | 101.81 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 782 | 101.82 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 783 | 101.82 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 787 | 101.83 | temperature | 30.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 788 | 101.83 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 791 | 101.83 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 797 | 101.84 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 824 | 101.87 | wind | 5.0 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 848 | 101.89 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 15 | NA |
| 849 | 101.89 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 910 | 101.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 924 | 101.97 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 928 | 101.97 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 936 | 101.98 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 937 | 101.98 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 6 |