Os06g0731900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF707 family protein.
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Os06g0731900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF707 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.82 | 0.209 | 9.92 | 0.106 | 0.931 | -0.529 | -0.21 | -0.156 | 0.0136 | 23.5 | 23.6 | 14 | -- | -- |
| 19.8 | 0.209 | 9.91 | 0.126 | 0.926 | -0.541 | -0.18 | -- | 0.0188 | 23.5 | 23.6 | 14 | -- | -- |
| 19.94 | 0.21 | 9.91 | 0.136 | 0.929 | -0.535 | -- | 0.0339 | 0.0199 | 23.5 | 23.6 | 14 | -- | -- |
| 19.94 | 0.208 | 9.91 | 0.128 | 0.93 | -0.533 | -- | -- | 0.0175 | 23.6 | 23.6 | 5 | -- | -- |
| 63.47 | 0.373 | 9.86 | 0.395 | -- | -1.24 | -- | 1 | 0.149 | -- | 23.6 | 14 | -- | -- |
| 24.39 | 0.232 | 9.93 | 0.036 | 1.08 | -- | -0.0791 | -- | -0.0533 | 0.103 | -- | -- | -- | -- |
| 24.42 | 0.231 | 9.93 | 0.0391 | 1.08 | -- | -- | -- | -0.0529 | 0.106 | -- | -- | -- | -- |
| 63.84 | 0.372 | 9.86 | 0.293 | -- | -1.18 | -- | -- | 0.145 | -- | 21.85 | 4 | -- | -- |
| 20.39 | 0.21 | 9.92 | -- | 0.94 | -0.5 | -- | -- | -0.00142 | 23.6 | 23.7 | 6 | -- | -- |
| 98.18 | 0.463 | 9.91 | 0.0736 | -- | -- | -- | -- | -0.0372 | -- | -- | -- | -- | -- |
| 24.46 | 0.231 | 9.93 | -- | 1.08 | -- | -- | -- | -0.0573 | 0.108 | -- | -- | -- | -- |
| 65.75 | 0.378 | 9.88 | -- | -- | -1.12 | -- | -- | 0.0861 | -- | 23.15 | 3 | -- | -- |
| 98.33 | 0.463 | 9.91 | -- | -- | -- | -- | -- | -0.0454 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.14 | temperature | 20 | 30 | > th | dose dependent | sin | 1 | NA |
| 8 | 19.28 | temperature | 30 | 30 | < th | dose dependent | sin | 2 | NA |
| 27 | 19.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 15 |
| 40 | 19.70 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 67 | 19.88 | temperature | 25 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 69 | 19.89 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 83 | 19.97 | temperature | 25 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 88 | 19.99 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 20 |
| 128 | 20.05 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 130 | 20.05 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 16 |
| 138 | 20.06 | temperature | 25 | 30 | > th | dose dependent | rect. | 20 | 23 |
| 198 | 20.12 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 233 | 20.17 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 239 | 20.17 | temperature | 25 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 301 | 20.28 | temperature | 25 | 30 | > th | dose dependent | rect. | 9 | 23 |
| 302 | 20.28 | temperature | 25 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 414 | 20.49 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 19 |
| 525 | 20.58 | temperature | 25 | 720 | > th | dose independent | rect. | 5 | 4 |
| 528 | 20.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 757 | 20.77 | temperature | 25 | 270 | < th | dose independent | sin | 5 | NA |
| 785 | 20.79 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 8 |
| 798 | 20.80 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 838 | 20.84 | temperature | 25 | 270 | > th | dose independent | sin | 4 | NA |
| 864 | 20.86 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 6 |
| 877 | 20.87 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 898 | 20.88 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 924 | 20.89 | temperature | 25 | 30 | > th | dose dependent | rect. | 22 | 14 |
| 941 | 20.90 | temperature | 20 | 14400 | > th | dose independent | rect. | 15 | 12 |
| 961 | 20.90 | temperature | 25 | 30 | > th | dose dependent | rect. | 24 | 12 |
| 971 | 20.91 | temperature | 20 | 14400 | > th | dose independent | sin | 14 | NA |