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Os06g0731500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0153) R2 : 0.0087
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0643 (0.0321) R2dN8 : 0.0112 R2N8 : 0.0087
σ : 0.287
deviance : 37.92
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28 0.249 10.9 0.0922 0.272 -0.147 0.336 -1.04 0.0749 11.7 23.1 663 -- --
31.15 0.26 11 -0.252 0.237 -0.163 0.0917 -- -0.0398 12.2 24 1321 -- --
28.37 0.248 10.9 0.0842 0.262 -0.141 -- -0.972 0.0724 11.5 23.05 578 -- --
30.12 0.257 10.9 -0.272 0.172 -0.217 -- -- -0.0199 8.75 26.4 24 -- --
32.11 0.264 10.9 0.0402 -- -0.122 -- -0.867 0.0674 -- 23 259 -- --
32.84 0.269 10.9 -0.212 0.245 -- 0.168 -- 0.0432 11.9 -- -- -- --
32.95 0.269 10.9 -0.205 0.245 -- -- -- 0.0437 11.7 -- -- -- --
31.59 0.262 11 -0.271 -- -0.231 -- -- -0.0191 -- 26.35 11 -- --
31.87 0.263 10.9 -- 0.166 -0.201 -- -- 0.0113 9.23 26.4 11 -- --
36.73 0.283 10.9 -0.212 -- -- -- -- 0.0407 -- -- -- -- --
34.06 0.273 10.9 -- 0.247 -- -- -- 0.0665 11.7 -- -- -- --
33.49 0.27 10.9 -- -- -0.213 -- -- 0.015 -- 26.4 11 -- --
37.92 0.287 10.9 -- -- -- -- -- 0.0643 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.10 temperature 10 90 > th dose dependent rect. 4 15
2 28.20 temperature 10 10 > th dose dependent rect. 5 15
3 28.32 temperature 30 720 < th dose dependent rect. 17 5
5 28.35 temperature 30 270 < th dose dependent rect. 7 21
6 28.38 temperature 25 720 < th dose independent rect. 17 5
8 28.38 temperature 10 270 > th dose dependent rect. 1 22
13 28.41 wind 3 270 < th dose dependent rect. 4 2
20 28.48 temperature 20 720 > th dose dependent rect. 12 21
21 28.49 temperature 20 720 > th dose dependent sin 16 NA
22 28.49 temperature 20 720 > th dose dependent rect. 12 17
26 28.50 wind 1 270 < th dose independent rect. 4 2
27 28.50 radiation 1 14400 < th dose dependent rect. 21 7
33 28.51 temperature 30 720 < th dose dependent rect. 16 20
34 28.51 temperature 20 720 > th dose dependent rect. 18 21
42 28.52 temperature 10 720 > th dose dependent rect. 3 21
52 28.54 temperature 10 270 > th dose dependent rect. 12 23
60 28.57 temperature 10 1440 > th dose dependent rect. 17 5
118 28.65 wind 7 90 < th dose independent rect. 4 15
122 28.66 wind 7 14400 > th dose independent rect. 6 1
126 28.66 temperature 20 90 > th dose dependent rect. 17 16
136 28.67 temperature 25 720 < th dose independent rect. 19 2
137 28.67 temperature 10 1440 > th dose dependent rect. 17 1
144 28.67 temperature 10 720 > th dose dependent rect. 20 19
172 28.70 wind 7 14400 < th dose independent rect. 6 1
173 28.70 temperature 20 270 > th dose dependent sin 12 NA
178 28.70 temperature 25 270 < th dose dependent rect. 17 13
189 28.71 temperature 10 1440 > th dose dependent rect. 20 1
213 28.73 wind 3 270 < th dose dependent rect. 3 4
239 28.75 temperature 30 720 < th dose dependent sin 17 NA
240 28.75 temperature 30 720 < th dose dependent no NA NA
247 28.75 temperature 10 720 > th dose dependent rect. 12 12
248 28.75 temperature 20 90 > th dose dependent rect. 17 14
258 28.75 temperature 30 720 < th dose dependent rect. 24 23
268 28.76 temperature 10 720 > th dose dependent rect. 18 22
305 28.78 temperature 15 30 > th dose dependent rect. 4 20
311 28.78 temperature 20 720 > th dose dependent rect. 7 23
314 28.79 temperature 25 720 < th dose independent rect. 16 20
320 28.79 temperature 20 1440 > th dose dependent rect. 8 18
336 28.79 temperature 20 10 > th dose dependent rect. 12 23
390 28.82 temperature 20 10 > th dose dependent sin 11 NA
391 28.82 temperature 20 720 > th dose dependent no NA NA
398 28.82 temperature 25 10 < th dose dependent rect. 18 14
400 28.82 temperature 25 90 < th dose dependent rect. 17 16
456 28.84 wind 7 14400 > th dose dependent rect. 6 1
467 28.84 temperature 10 1440 > th dose dependent rect. 8 16
500 28.85 wind 9 90 < th dose dependent rect. 4 15
512 28.85 temperature 20 270 > th dose dependent rect. 15 17
630 28.87 temperature 20 1440 > th dose dependent rect. 20 23
631 28.87 temperature 20 1440 > th dose dependent rect. 23 23
633 28.87 temperature 30 270 < th dose dependent rect. 20 23
634 28.88 temperature 10 1440 > th dose dependent sin 18 NA
659 28.88 temperature 25 10 < th dose dependent rect. 16 16
696 28.89 temperature 20 90 > th dose independent rect. 4 15
697 28.89 temperature 20 270 > th dose independent rect. 14 17
760 28.90 temperature 25 270 < th dose dependent sin 12 NA
894 28.92 temperature 20 270 > th dose independent rect. 12 20