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Os06g0731200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to ABC transporter-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0257) R2 : 0.454
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.939 (0.0628) R2dC : 0.281 R2C : 0.177
β3 : -1.48 (0.12) R2dE : 0.203 R2E : 0.131
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.261 (0.0556) R2dN8 : 0.0349 R2N8 : 0.0634
σ : 0.479
deviance : 105.83
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C
peak time of C : 22.5
E
wheather : temperature
threshold : 14.69
memory length : 446
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
100.21 0.47 10.1 0.323 0.91 -1.36 -0.896 2.37 -0.134 22 19.5 392 -- --
103.66 0.474 10.1 -0.111 0.93 -1.48 -0.7 -- -0.263 22.4 14.92 443 -- --
103.07 0.473 10 0.365 0.859 -1.35 -- 2.43 -0.136 22.1 19.3 333 -- --
105.67 0.479 10.1 -0.0817 0.936 -1.46 -- -- -0.267 22.5 14.62 447 -- --
119.17 0.511 10 0.292 -- -1.71 -- 2.23 -0.124 -- 17.6 4 -- --
128.83 0.532 10.1 -0.428 0.845 -- -0.512 -- -0.486 0.0927 -- -- -- --
129.92 0.534 10.1 -0.409 0.847 -- -- -- -0.484 0.226 -- -- -- --
123.98 0.519 10.1 -0.053 -- -1.67 -- -- -0.221 -- 17.01 2 -- --
105.83 0.479 10.1 -- 0.939 -1.48 -- -- -0.261 22.5 14.69 446 -- --
175.06 0.618 10.1 -0.381 -- -- -- -- -0.471 -- -- -- -- --
134.32 0.542 10.1 -- 0.841 -- -- -- -0.438 0.2 -- -- -- --
124.05 0.519 10.1 -- -- -1.89 -- -- -0.213 -- 12.46 2 -- --
178.89 0.624 10.1 -- -- -- -- -- -0.429 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 90.51 atmosphere 995 43200 > th dose independent rect. 15 2
2 90.72 atmosphere 995 43200 < th dose independent rect. 15 2
3 90.85 atmosphere 995 43200 < th dose dependent rect. 15 4
8 91.09 atmosphere 995 43200 > th dose independent rect. 14 5
14 91.44 atmosphere 995 43200 < th dose independent rect. 14 5
28 92.40 humidity 80 43200 < th dose dependent rect. 20 5
42 93.44 wind 9 43200 > th dose dependent rect. 20 1
47 93.53 wind 3 43200 > th dose independent rect. 20 1
48 93.59 humidity 80 43200 > th dose independent rect. 21 4
51 93.73 wind 3 43200 < th dose independent rect. 20 1
61 93.96 humidity 80 43200 < th dose independent rect. 20 6
66 94.18 wind 1 43200 > th dose independent rect. 8 3
96 94.99 humidity 80 43200 < th dose dependent rect. 23 1
101 95.21 wind 1 43200 < th dose dependent rect. 8 4
113 95.44 radiation 10 43200 > th dose independent rect. 10 1
130 95.81 wind 1 43200 > th dose independent rect. 8 1
149 96.10 wind 3 43200 > th dose dependent rect. 13 18
155 96.18 wind 9 43200 > th dose dependent rect. 13 19
166 96.38 wind 1 43200 > th dose dependent rect. 6 15
182 96.54 wind 1 43200 > th dose dependent rect. 6 11
184 96.56 wind 1 43200 > th dose dependent rect. 9 7
189 96.61 wind 3 43200 > th dose independent rect. 9 6
191 96.62 wind 1 43200 > th dose dependent sin 23 NA
201 96.68 wind 9 43200 > th dose independent rect. 20 1
203 96.69 wind 9 43200 < th dose dependent rect. 6 15
210 96.73 wind 1 43200 > th dose dependent rect. 19 2
222 96.77 wind 9 43200 < th dose dependent rect. 6 11
223 96.78 humidity 80 43200 > th dose independent rect. 24 1
238 96.85 wind 1 43200 < th dose independent rect. 8 3
239 96.85 wind 9 43200 < th dose dependent rect. 9 7
251 96.89 wind 9 43200 < th dose dependent rect. 19 2
256 96.91 wind 5 43200 < th dose dependent rect. 20 1
258 96.93 wind 9 43200 < th dose dependent sin 23 NA
298 97.06 wind 3 43200 > th dose independent rect. 6 10
349 97.20 temperature 20 270 > th dose dependent rect. 3 19
374 97.29 humidity 80 43200 < th dose independent rect. 23 1
392 97.34 wind 5 43200 < th dose independent rect. 14 17
434 97.43 atmosphere 995 43200 > th dose independent sin 21 NA
435 97.43 wind 5 43200 > th dose independent rect. 15 1
437 97.43 radiation 10 43200 < th dose dependent rect. 8 2
458 97.49 wind 9 43200 > th dose independent rect. 18 20
476 97.52 humidity 90 43200 < th dose dependent rect. 4 1
478 97.53 wind 9 43200 < th dose independent rect. 20 1
505 97.60 wind 5 43200 < th dose independent rect. 14 13
519 97.63 wind 3 43200 < th dose independent rect. 8 7
526 97.64 wind 9 43200 > th dose independent rect. 13 21
548 97.70 wind 5 43200 < th dose independent rect. 14 10
592 97.80 wind 5 43200 > th dose dependent rect. 15 1
599 97.81 wind 5 43200 < th dose independent rect. 15 1
601 97.81 wind 3 43200 > th dose independent rect. 4 18
615 97.84 wind 3 43200 < th dose independent rect. 6 10
629 97.87 atmosphere 995 43200 < th dose independent sin 21 NA
630 97.87 wind 5 43200 > th dose independent rect. 14 10
644 97.92 wind 5 43200 > th dose independent rect. 14 13
645 97.92 wind 5 43200 > th dose independent rect. 14 17
646 97.92 wind 3 43200 < th dose dependent rect. 9 1
731 98.07 wind 9 43200 > th dose dependent sin 19 NA
751 98.11 wind 3 43200 > th dose independent sin 0 NA
782 98.17 wind 9 43200 > th dose independent rect. 18 22
822 98.24 wind 9 43200 < th dose independent rect. 13 21
825 98.25 wind 9 43200 > th dose dependent rect. 9 12
867 98.33 temperature 15 270 > th dose dependent sin 21 NA
942 98.43 wind 9 43200 < th dose dependent rect. 11 20
947 98.44 radiation 40 43200 > th dose dependent rect. 11 1
953 98.44 wind 9 14400 > th dose dependent rect. 18 17
977 98.47 radiation 40 43200 > th dose independent rect. 10 2
984 98.47 wind 9 43200 < th dose dependent rect. 9 22