Os06g0731000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Eggshell protein family protein.
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Os06g0731000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Eggshell protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 146.99 | 0.57 | 10.7 | -0.505 | 1.48 | 1.17 | -0.304 | 3.47 | -0.864 | 19.5 | 42.85 | 675 | -- | -- |
| 159.92 | 0.589 | 10.7 | -0.663 | 1.46 | 1.36 | 0.26 | -- | -0.913 | 19.8 | 40 | 630 | -- | -- |
| 147.17 | 0.565 | 10.7 | -0.506 | 1.49 | 1.16 | -- | 3.33 | -0.863 | 19.5 | 43.02 | 670 | -- | -- |
| 160.1 | 0.589 | 10.7 | -0.725 | 1.48 | 1.33 | -- | -- | -0.928 | 19.7 | 40 | 629 | -- | -- |
| 221.62 | 0.693 | 10.7 | -0.755 | -- | 2.16 | -- | 2.99 | -1.02 | -- | 33.5 | 698 | -- | -- |
| 195.04 | 0.655 | 10.7 | -0.64 | 2.13 | -- | 1.07 | -- | -0.803 | 19 | -- | -- | -- | -- |
| 197.99 | 0.659 | 10.7 | -0.66 | 2.13 | -- | -- | -- | -0.801 | 19 | -- | -- | -- | -- |
| 232.96 | 0.711 | 10.7 | -0.812 | -- | 2.23 | -- | -- | -1.08 | -- | 30 | 677 | -- | -- |
| 173.79 | 0.614 | 10.7 | -- | 1.49 | 1.29 | -- | -- | -0.845 | 19.7 | 40 | 630 | -- | -- |
| 436.84 | 0.977 | 10.6 | -0.703 | -- | -- | -- | -- | -0.84 | -- | -- | -- | -- | -- |
| 209.48 | 0.677 | 10.7 | -- | 2.14 | -- | -- | -- | -0.727 | 19 | -- | -- | -- | -- |
| 250.13 | 0.737 | 10.7 | -- | -- | 2.22 | -- | -- | -1 | -- | 30.33 | 679 | -- | -- |
| 449.89 | 0.99 | 10.6 | -- | -- | -- | -- | -- | -0.762 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 144.73 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 3 | 145.03 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 5 | 145.19 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 7 | 145.26 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 8 | 145.30 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 12 | 145.52 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 21 | 146.03 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 25 | 146.20 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 30 | 146.53 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 37 | 146.73 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 39 | 146.81 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 42 | 146.92 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 43 | 146.97 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 49 | 147.06 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 75 | 147.60 | radiation | 40.0 | 720 | > th | dose dependent | sin | 11 | NA |
| 117 | 147.97 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 121 | 148.02 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 127 | 148.10 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 155 | 148.41 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 161 | 148.47 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 208 | 148.96 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 236 | 149.22 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 8 | 3 |
| 290 | 149.51 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 8 | 7 |
| 310 | 149.53 | radiation | 40.0 | 720 | > th | dose dependent | no | NA | NA |
| 487 | 149.68 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 513 | 149.75 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 13 |
| 540 | 149.91 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 13 |
| 558 | 149.98 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 620 | 150.23 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 685 | 150.45 | wind | 5.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 688 | 150.47 | wind | 3.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 699 | 150.51 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 14 |
| 703 | 150.51 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 19 |
| 733 | 150.61 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 741 | 150.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 774 | 150.75 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 913 | 151.20 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 916 | 151.20 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 953 | 151.28 | humidity | 60.0 | 14400 | > th | dose dependent | sin | 21 | NA |
| 961 | 151.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 970 | 151.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 3 |
| 981 | 151.37 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 18 | 2 |