Os06g0730500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0730500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.64 | 0.331 | 9.1 | -0.894 | 0.482 | -1 | 0.54 | -0.441 | 0.346 | 4.41 | 23.55 | 60 | -- | -- |
| 49.91 | 0.329 | 9.11 | -0.943 | 0.481 | -0.95 | 0.467 | -- | 0.34 | 4.42 | 23.59 | 61 | -- | -- |
| 50.3 | 0.33 | 9.11 | -0.925 | 0.479 | -0.988 | -- | -0.221 | 0.341 | 4.27 | 23.39 | 58 | -- | -- |
| 50.36 | 0.331 | 9.11 | -0.952 | 0.481 | -0.961 | -- | -- | 0.333 | 4.28 | 23.5 | 60 | -- | -- |
| 62.19 | 0.367 | 9.1 | -0.883 | -- | -0.789 | -- | -0.0534 | 0.379 | -- | 23.2 | 59 | -- | -- |
| 61.34 | 0.367 | 9.08 | -0.742 | 0.394 | -- | 0.603 | -- | 0.474 | 5.49 | -- | -- | -- | -- |
| 62.21 | 0.369 | 9.08 | -0.741 | 0.398 | -- | -- | -- | 0.471 | 5.27 | -- | -- | -- | -- |
| 62.18 | 0.367 | 9.11 | -0.884 | -- | -0.779 | -- | -- | 0.377 | -- | 23.2 | 46 | -- | -- |
| 72.04 | 0.397 | 9.07 | -- | 0.424 | -0.578 | -- | -- | 0.488 | 4.61 | 23.22 | 59 | -- | -- |
| 70.46 | 0.392 | 9.08 | -0.727 | -- | -- | -- | -- | 0.481 | -- | -- | -- | -- | -- |
| 76.67 | 0.41 | 9.06 | -- | 0.385 | -- | -- | -- | 0.554 | 5.34 | -- | -- | -- | -- |
| 81.34 | 0.42 | 9.07 | -- | -- | -0.462 | -- | -- | 0.514 | -- | 23 | 40 | -- | -- |
| 84.4 | 0.429 | 9.06 | -- | -- | -- | -- | -- | 0.562 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.52 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 4 | 50.17 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 5 | 50.19 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 6 | 50.19 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 7 | 50.20 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 22 | 23 |
| 17 | 50.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 20 | 50.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 21 | 50.35 | temperature | 25.0 | 30 | < th | dose dependent | no | NA | NA |
| 22 | 50.35 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 23 | 50.35 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 24 | 50.35 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 25 | 50.35 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 27 | 50.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 29 | 50.38 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 30 | 50.39 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 31 | 50.40 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 35 | 50.43 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 61 | 50.57 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 64 | 50.59 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 19 |
| 87 | 50.69 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 17 |
| 88 | 50.70 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 102 | 50.82 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 11 |
| 103 | 50.83 | temperature | 20.0 | 90 | > th | dose independent | rect. | 17 | 22 |
| 106 | 50.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 11 |
| 107 | 50.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 11 |
| 129 | 50.98 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 131 | 50.98 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 137 | 50.99 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 151 | 51.06 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 152 | 51.06 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 158 | 51.11 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 195 | 51.36 | temperature | 25.0 | 30 | < th | dose dependent | sin | 5 | NA |
| 205 | 51.42 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 216 | 51.48 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 21 |
| 222 | 51.52 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 231 | 51.57 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 21 |
| 252 | 51.64 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 256 | 51.67 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 9 |
| 260 | 51.68 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 9 |
| 297 | 51.76 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 299 | 51.76 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 308 | 51.79 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 312 | 51.79 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 16 |
| 316 | 51.80 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 4 |
| 321 | 51.81 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 14 |
| 331 | 51.83 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 9 |
| 334 | 51.84 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 338 | 51.84 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 4 |
| 340 | 51.84 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 342 | 51.84 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 17 | 11 |
| 366 | 51.88 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 378 | 51.89 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 11 |
| 390 | 51.90 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 395 | 51.90 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 22 |
| 428 | 51.95 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 441 | 51.96 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 486 | 52.00 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 17 |
| 516 | 52.03 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 517 | 52.03 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 519 | 52.03 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 9 |
| 570 | 52.07 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 597 | 52.09 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 644 | 52.12 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 703 | 52.17 | temperature | 20.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 704 | 52.17 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 737 | 52.19 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 753 | 52.20 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 766 | 52.21 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 768 | 52.21 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 16 |
| 778 | 52.22 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 802 | 52.24 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 811 | 52.25 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 837 | 52.27 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 845 | 52.28 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 853 | 52.28 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 14 |
| 885 | 52.31 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 898 | 52.33 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 953 | 52.36 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 981 | 52.39 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 982 | 52.39 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 6 |
| 984 | 52.39 | temperature | 20.0 | 270 | < th | dose dependent | sin | 9 | NA |