Os06g0728200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0728200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.19 | 0.402 | 3.54 | 0.282 | 0.114 | 0.493 | -0.00592 | 1.12 | 0.187 | 10.7 | 80.03 | 1389 | -- | -- |
| 72.28 | 0.396 | 3.53 | 0.354 | 0.0491 | 0.634 | -0.0271 | -- | 0.227 | 10.3 | 79.65 | 2653 | -- | -- |
| 73.19 | 0.398 | 3.54 | 0.282 | 0.114 | 0.493 | -- | 1.12 | 0.187 | 10.7 | 80.03 | 1388 | -- | -- |
| 72.27 | 0.396 | 3.53 | 0.352 | 0.0535 | 0.635 | -- | -- | 0.227 | 9.12 | 79.84 | 2653 | -- | -- |
| 73.58 | 0.4 | 3.54 | 0.285 | -- | 0.47 | -- | 1.16 | 0.182 | -- | 79 | 1227 | -- | -- |
| 78.13 | 0.414 | 3.54 | 0.359 | 0.126 | -- | 0.0516 | -- | 0.172 | 11.9 | -- | -- | -- | -- |
| 78.14 | 0.414 | 3.54 | 0.361 | 0.126 | -- | -- | -- | 0.172 | 11.8 | -- | -- | -- | -- |
| 72.37 | 0.396 | 3.53 | 0.344 | -- | 0.622 | -- | -- | 0.232 | -- | 80.06 | 2565 | -- | -- |
| 75.39 | 0.404 | 3.53 | -- | 0.0474 | 0.674 | -- | -- | 0.213 | 7.93 | 80.27 | 2650 | -- | -- |
| 79.13 | 0.416 | 3.54 | 0.357 | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
| 81.57 | 0.422 | 3.55 | -- | 0.121 | -- | -- | -- | 0.132 | 11.6 | -- | -- | -- | -- |
| 75.02 | 0.403 | 3.53 | -- | -- | 0.665 | -- | -- | 0.22 | -- | 82 | 2542 | -- | -- |
| 82.49 | 0.424 | 3.55 | -- | -- | -- | -- | -- | 0.131 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.86 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 16 |
| 2 | 70.86 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 16 |
| 3 | 71.31 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 16 |
| 4 | 71.31 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 16 |
| 5 | 71.38 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 6 |
| 6 | 71.42 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 14 | 71.54 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 24 | 71.68 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 29 | 71.70 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 8 |
| 30 | 71.70 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 8 |
| 31 | 71.71 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 45 | 71.79 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 50 | 71.80 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 51 | 71.81 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 67 | 71.89 | wind | 3.0 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 81 | 71.94 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 83 | 71.94 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 100 | 71.99 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 9 | 2 |
| 113 | 72.03 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 124 | 72.08 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 125 | 72.09 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 14 |
| 133 | 72.10 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 137 | 72.11 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 148 | 72.14 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 149 | 72.15 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 159 | 72.16 | wind | 3.0 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 167 | 72.17 | humidity | 90.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 190 | 72.18 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 21 |
| 205 | 72.20 | wind | 3.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 207 | 72.20 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 212 | 72.21 | wind | 3.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 226 | 72.22 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 256 | 72.23 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 20 |
| 259 | 72.24 | wind | 3.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 305 | 72.27 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 315 | 72.28 | wind | 3.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 403 | 72.33 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 18 |
| 409 | 72.33 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 13 |
| 425 | 72.34 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 429 | 72.34 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 477 | 72.37 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 502 | 72.38 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 24 | 15 |
| 521 | 72.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 538 | 72.40 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 669 | 72.48 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 681 | 72.48 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 16 |
| 694 | 72.49 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 710 | 72.50 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 21 |
| 727 | 72.51 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 24 | 16 |
| 771 | 72.53 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 22 |
| 778 | 72.54 | wind | 1.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 779 | 72.54 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 781 | 72.54 | wind | 3.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 782 | 72.54 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 7 |
| 815 | 72.55 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 18 |
| 825 | 72.55 | wind | 5.0 | 43200 | < th | dose dependent | sin | 4 | NA |
| 850 | 72.56 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 879 | 72.58 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 890 | 72.58 | wind | 3.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 902 | 72.59 | humidity | 90.0 | 14400 | < th | dose independent | sin | 16 | NA |
| 904 | 72.59 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 916 | 72.59 | wind | 9.0 | 43200 | < th | dose independent | rect. | 24 | 14 |
| 918 | 72.59 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 18 |
| 960 | 72.61 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 961 | 72.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 963 | 72.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 2 | 12 |
| 975 | 72.61 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 979 | 72.61 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 19 | 12 |
| 987 | 72.62 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 993 | 72.62 | wind | 9.0 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 996 | 72.62 | wind | 9.0 | 43200 | > th | dose independent | rect. | 24 | 14 |