Os06g0727300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glycosyltransferase QUASIMODO1 (EC 2.4.1.-).
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Os06g0727300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glycosyltransferase QUASIMODO1 (EC 2.4.1.-).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.1 | 0.249 | 9.05 | -0.386 | 0.765 | -0.507 | -0.576 | -0.313 | -0.127 | 21.7 | 23.09 | 89 | -- | -- |
| 28.22 | 0.247 | 9.05 | -0.412 | 0.765 | -0.464 | -0.662 | -- | -0.132 | 21.7 | 23.1 | 73 | -- | -- |
| 29.2 | 0.254 | 9.04 | -0.32 | 0.783 | -0.527 | -- | -0.639 | -0.118 | 21.8 | 23.09 | 89 | -- | -- |
| 29.73 | 0.254 | 9.05 | -0.397 | 0.766 | -0.446 | -- | -- | -0.133 | 21.7 | 23.3 | 74 | -- | -- |
| 54.33 | 0.343 | 9.06 | -0.517 | -- | -0.731 | -- | 0.267 | -0.255 | -- | 29.7 | 703 | -- | -- |
| 30.75 | 0.26 | 9.04 | -0.32 | 0.729 | -- | -0.635 | -- | -0.0713 | 21.5 | -- | -- | -- | -- |
| 32.23 | 0.266 | 9.04 | -0.297 | 0.731 | -- | -- | -- | -0.0704 | 21.5 | -- | -- | -- | -- |
| 54.52 | 0.344 | 9.05 | -0.493 | -- | -0.742 | -- | -- | -0.219 | -- | 29.7 | 697 | -- | -- |
| 33.44 | 0.271 | 9.04 | -- | 0.759 | -0.285 | -- | -- | -0.0689 | 21.6 | 23.1 | 73 | -- | -- |
| 63.64 | 0.373 | 9.02 | -0.292 | -- | -- | -- | -- | -0.0727 | -- | -- | -- | -- | -- |
| 34.55 | 0.275 | 9.03 | -- | 0.731 | -- | -- | -- | -0.0374 | 21.4 | -- | -- | -- | -- |
| 60.23 | 0.361 | 9.03 | -- | -- | -0.574 | -- | -- | -0.111 | -- | 68.97 | 681 | -- | -- |
| 65.89 | 0.379 | 9.01 | -- | -- | -- | -- | -- | -0.0403 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.70 | humidity | 80 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 7 | 27.91 | humidity | 70 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 9 | 27.91 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 19 |
| 16 | 27.96 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 14 |
| 18 | 28.01 | humidity | 70 | 4320 | > th | dose independent | rect. | 3 | 6 |
| 29 | 28.02 | temperature | 20 | 90 | < th | dose independent | rect. | 16 | 14 |
| 39 | 28.04 | temperature | 20 | 10 | < th | dose independent | rect. | 17 | 18 |
| 46 | 28.06 | temperature | 25 | 90 | < th | dose dependent | sin | 14 | NA |
| 65 | 28.10 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 17 |
| 88 | 28.14 | temperature | 20 | 30 | > th | dose independent | rect. | 17 | 11 |
| 99 | 28.16 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 11 |
| 105 | 28.17 | temperature | 20 | 10 | < th | dose independent | sin | 10 | NA |
| 120 | 28.19 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 9 |
| 140 | 28.20 | temperature | 20 | 10 | < th | dose independent | rect. | 20 | 14 |
| 141 | 28.20 | temperature | 20 | 30 | > th | dose independent | rect. | 13 | 15 |
| 164 | 28.21 | temperature | 25 | 90 | < th | dose dependent | rect. | 10 | 15 |
| 174 | 28.22 | temperature | 20 | 90 | < th | dose independent | rect. | 13 | 17 |
| 202 | 28.25 | humidity | 80 | 4320 | < th | dose independent | rect. | 5 | 5 |
| 248 | 28.28 | temperature | 20 | 90 | > th | dose independent | sin | 11 | NA |
| 249 | 28.28 | humidity | 70 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 252 | 28.28 | humidity | 70 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 278 | 28.29 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 19 |
| 301 | 28.30 | temperature | 25 | 90 | < th | dose dependent | rect. | 4 | 23 |
| 316 | 28.31 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 9 |
| 334 | 28.32 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 22 |
| 398 | 28.35 | temperature | 20 | 30 | < th | dose independent | rect. | 9 | 21 |
| 416 | 28.36 | humidity | 60 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 437 | 28.37 | humidity | 60 | 4320 | > th | dose independent | rect. | 18 | 18 |
| 491 | 28.38 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 521 | 28.39 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 533 | 28.40 | temperature | 20 | 30 | > th | dose independent | rect. | 8 | 20 |
| 537 | 28.40 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 561 | 28.41 | temperature | 20 | 30 | > th | dose independent | rect. | 8 | 23 |
| 573 | 28.41 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 650 | 28.45 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 6 | 21 |
| 669 | 28.46 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 692 | 28.46 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 4 | 20 |
| 742 | 28.48 | wind | 1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 770 | 28.49 | humidity | 50 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 789 | 28.49 | temperature | 20 | 10 | < th | dose independent | rect. | 5 | 23 |
| 790 | 28.49 | temperature | 20 | 10 | < th | dose independent | rect. | 21 | 23 |
| 791 | 28.49 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 23 |
| 804 | 28.50 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |
| 816 | 28.50 | temperature | 20 | 10 | > th | dose independent | rect. | 17 | 23 |
| 817 | 28.50 | temperature | 20 | 10 | < th | dose independent | rect. | 3 | 23 |
| 852 | 28.51 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 23 |
| 877 | 28.52 | wind | 1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 880 | 28.52 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 905 | 28.52 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 907 | 28.53 | humidity | 60 | 4320 | > th | dose independent | sin | 8 | NA |
| 914 | 28.53 | humidity | 60 | 4320 | < th | dose independent | rect. | 18 | 18 |