Os06g0726300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NAM-like protein.
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Os06g0726300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NAM-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 251.19 | 0.745 | 8.59 | 3.44 | 0.524 | 0.433 | -0.478 | -4.05 | 0.994 | 3.62 | 0.2005 | 9174 | -- | -- |
| 278.11 | 0.777 | 8.49 | 3.07 | 0.528 | 0.833 | -0.373 | -- | 1.03 | 3.55 | 3.511 | 47520 | -- | -- |
| 249.69 | 0.736 | 8.59 | 3.49 | 0.538 | 0.417 | -- | -4.29 | 1.01 | 3.52 | 0.294 | 15966 | -- | -- |
| 278.37 | 0.777 | 8.49 | 2.99 | 0.539 | 0.888 | -- | -- | 0.977 | 3.66 | 4 | 47520 | -- | -- |
| 259.82 | 0.751 | 8.58 | 3.53 | -- | 0.658 | -- | -4.55 | 1.07 | -- | 0.3 | 17328 | -- | -- |
| 285.47 | 0.792 | 8.44 | 3.64 | 0.55 | -- | -0.387 | -- | 1.19 | 3.59 | -- | -- | -- | -- |
| 285.92 | 0.792 | 8.44 | 3.65 | 0.548 | -- | -- | -- | 1.19 | 3.63 | -- | -- | -- | -- |
| 294.41 | 0.799 | 8.49 | 2.97 | -- | 0.898 | -- | -- | 0.97 | -- | 4.2 | 47520 | -- | -- |
| 346.74 | 0.867 | 8.65 | -- | 0.74 | 2.8 | -- | -- | 0.268 | 4.49 | 7.5 | 47520 | -- | -- |
| 302.63 | 0.813 | 8.44 | 3.67 | -- | -- | -- | -- | 1.21 | -- | -- | -- | -- | -- |
| 636.74 | 1.18 | 8.53 | -- | 0.62 | -- | -- | -- | 0.786 | 3.58 | -- | -- | -- | -- |
| 357.69 | 0.881 | 8.67 | -- | -- | 2.81 | -- | -- | 0.189 | -- | 7.423 | 47520 | -- | -- |
| 658.17 | 1.2 | 8.54 | -- | -- | -- | -- | -- | 0.799 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 229.52 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 2 | 229.77 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 4 |
| 4 | 229.96 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 6 | 231.56 | wind | 7.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 13 | 232.38 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 15 | 232.64 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 18 | 233.43 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 19 | 233.47 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 76 | 239.26 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 10 |
| 88 | 240.23 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 4 |
| 89 | 240.25 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 93 | 240.30 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 97 | 240.34 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 11 |
| 114 | 241.06 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 116 | 241.13 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 6 | 4 |
| 119 | 241.25 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 6 | 13 |
| 149 | 241.78 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 155 | 241.92 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 156 | 241.97 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 14 | 3 |
| 158 | 242.01 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 175 | 242.22 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 179 | 242.27 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 184 | 242.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 192 | 242.40 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 194 | 242.40 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 199 | 242.52 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 200 | 242.53 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 202 | 242.53 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 212 | 242.68 | wind | 1.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 213 | 242.72 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 220 | 242.81 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 227 | 242.87 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 232 | 242.90 | wind | 1.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 235 | 242.93 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 262 | 243.11 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 273 | 243.21 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 16 |
| 280 | 243.24 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 19 |
| 293 | 243.35 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 309 | 243.48 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 310 | 243.48 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 328 | 243.61 | temperature | 20.0 | 14400 | < th | dose dependent | sin | 23 | NA |
| 357 | 243.80 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 7 |
| 367 | 243.87 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 15 | 7 |
| 379 | 243.95 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 17 |
| 388 | 243.99 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 393 | 244.02 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 413 | 244.11 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 423 | 244.15 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 425 | 244.15 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 427 | 244.16 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 430 | 244.17 | wind | 1.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 434 | 244.18 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 2 | 8 |
| 435 | 244.19 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 459 | 244.26 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 7 | 9 |
| 519 | 244.42 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 21 |
| 526 | 244.44 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 11 | 4 |
| 535 | 244.46 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 2 | 9 |
| 540 | 244.47 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 543 | 244.48 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 558 | 244.50 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 14 |
| 568 | 244.52 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 572 | 244.52 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 583 | 244.54 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 585 | 244.54 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 605 | 244.58 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 24 | 10 |
| 620 | 244.60 | atmosphere | 1000.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 634 | 244.62 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 14 |
| 651 | 244.66 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 655 | 244.66 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 665 | 244.68 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 677 | 244.69 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 689 | 244.71 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 715 | 244.75 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 768 | 244.84 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 4 | 8 |
| 790 | 244.86 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 806 | 244.91 | wind | 1.0 | 43200 | > th | dose independent | rect. | 17 | 18 |
| 807 | 244.91 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 906 | 245.06 | temperature | 15.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 915 | 245.07 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 14 | 3 |