Os06g0725500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF241, plant family protein.
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Os06g0725500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF241, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 195.69 | 0.657 | 3.78 | 0.552 | 0.353 | 2.31 | 0.0109 | 2.25 | -0.295 | 9.47 | 19.77 | 787 | -- | -- |
| 196.88 | 0.653 | 3.75 | 0.658 | 0.35 | 1.29 | 0.315 | -- | -0.209 | 10.4 | 22.89 | 649 | -- | -- |
| 195.69 | 0.652 | 3.78 | 0.55 | 0.355 | 2.33 | -- | 2.31 | -0.297 | 9.45 | 19.72 | 788 | -- | -- |
| 196.87 | 0.653 | 3.74 | 0.642 | 0.34 | 1.29 | -- | -- | -0.21 | 10 | 23 | 716 | -- | -- |
| 202.69 | 0.663 | 3.79 | 0.567 | -- | 2.52 | -- | 2.48 | -0.277 | -- | 19.89 | 777 | -- | -- |
| 217.42 | 0.691 | 3.78 | 0.3 | 0.479 | -- | 0.168 | -- | -0.414 | 10.1 | -- | -- | -- | -- |
| 217.53 | 0.691 | 3.78 | 0.306 | 0.479 | -- | -- | -- | -0.414 | 10.1 | -- | -- | -- | -- |
| 203.52 | 0.664 | 3.74 | 0.682 | -- | 1.45 | -- | -- | -0.183 | -- | 23.04 | 743 | -- | -- |
| 206.3 | 0.669 | 3.77 | -- | 0.376 | 0.976 | -- | -- | -0.32 | 10 | 23.1 | 669 | -- | -- |
| 231.38 | 0.711 | 3.8 | 0.3 | -- | -- | -- | -- | -0.414 | -- | -- | -- | -- | -- |
| 220 | 0.694 | 3.79 | -- | 0.478 | -- | -- | -- | -0.448 | 10 | -- | -- | -- | -- |
| 214.27 | 0.682 | 3.77 | -- | -- | 1.13 | -- | -- | -0.298 | -- | 23.1 | 720 | -- | -- |
| 233.75 | 0.714 | 3.8 | -- | -- | -- | -- | -- | -0.448 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 181.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 8 |
| 9 | 183.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 7 |
| 20 | 184.21 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 3 |
| 78 | 185.90 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 82 | 185.94 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 93 | 186.09 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 195 | 187.97 | temperature | 15 | 270 | > th | dose dependent | sin | 5 | NA |
| 200 | 188.12 | temperature | 25 | 270 | < th | dose dependent | sin | 3 | NA |
| 246 | 188.67 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 334 | 189.65 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 12 |
| 413 | 190.35 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 6 |
| 442 | 190.54 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 523 | 191.21 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 10 |
| 544 | 191.34 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 639 | 192.03 | temperature | 15 | 30 | > th | dose dependent | rect. | 4 | 16 |
| 645 | 192.07 | temperature | 15 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 653 | 192.12 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 1 |
| 676 | 192.29 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 700 | 192.51 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 16 |
| 729 | 192.70 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 10 |
| 764 | 192.88 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 773 | 192.91 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 1 |
| 802 | 193.10 | temperature | 20 | 720 | > th | dose independent | sin | 6 | NA |
| 822 | 193.19 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 13 |
| 886 | 193.53 | wind | 9 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 911 | 193.69 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |