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Os06g0724200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0197) R2 : 0.476
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.972 (0.051) R2dC : 0.421 R2C : 0.393
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.308 (0.0413) R2dN8 : 0.0828 R2N8 : 0.0553
σ : 0.37
deviance : 62.65
__
_____
C
peak time of C : 19.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
40.72 0.3 10.3 0.506 0.975 -0.303 -0.0162 0.768 0.294 19.4 20.4 131 -- --
43.51 0.307 10.3 0.634 0.966 -0.359 -0.0534 -- 0.325 19.4 20.45 139 -- --
40.7 0.297 10.3 0.5 0.983 -0.29 -- 0.781 0.292 19.4 20.5 131 -- --
43.52 0.307 10.3 0.636 0.969 -0.359 -- -- 0.322 19.4 20.5 139 -- --
71.6 0.394 10.3 0.154 -- -0.706 -- 1.56 0.143 -- 25.85 526 -- --
48.37 0.326 10.3 0.733 0.98 -- -0.113 -- 0.391 19.1 -- -- -- --
48.4 0.326 10.3 0.735 0.979 -- -- -- 0.39 19.1 -- -- -- --
74.52 0.402 10.3 0.529 -- -0.664 -- -- 0.177 -- 25.81 510 -- --
51.89 0.336 10.3 -- 0.954 -0.636 -- -- 0.247 19.6 19.37 213 -- --
99.05 0.465 10.3 0.717 -- -- -- -- 0.373 -- -- -- -- --
62.65 0.37 10.3 -- 0.972 -- -- -- 0.308 19.2 -- -- -- --
81.66 0.421 10.3 -- -- -0.738 -- -- 0.0973 -- 25.83 523 -- --
112.6 0.495 10.3 -- -- -- -- -- 0.293 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.32 temperature 10.0 270 > th dose dependent rect. 17 9
3 36.39 temperature 30.0 90 < th dose dependent rect. 14 18
7 36.46 temperature 30.0 10 < th dose dependent rect. 14 18
32 37.32 temperature 30.0 10 < th dose dependent rect. 12 20
39 37.44 temperature 30.0 270 < th dose dependent rect. 22 8
81 37.99 temperature 25.0 270 < th dose independent rect. 15 15
85 38.04 temperature 20.0 90 > th dose independent rect. 20 16
114 38.25 wind 1.0 270 > th dose independent rect. 12 17
121 38.29 temperature 15.0 10 > th dose dependent rect. 20 8
155 38.56 wind 7.0 270 < th dose independent rect. 16 10
166 38.63 temperature 20.0 90 > th dose independent rect. 6 22
169 38.64 precipitation 0.1 270 < th dose independent rect. 2 14
171 38.64 precipitation 0.1 270 < th dose dependent rect. 2 14
173 38.65 temperature 30.0 90 < th dose dependent sin 8 NA
182 38.67 temperature 20.0 270 < th dose independent rect. 23 7
183 38.67 temperature 20.0 90 > th dose independent rect. 8 19
204 38.76 radiation 30.0 270 < th dose independent rect. 16 10
219 38.81 temperature 10.0 270 > th dose independent rect. 16 10
221 38.81 temperature 10.0 270 > th dose independent rect. 2 14
222 38.81 atmosphere 1015.0 270 < th dose independent rect. 2 14
250 38.90 temperature 10.0 90 > th dose dependent rect. 6 21
252 38.91 precipitation 0.1 270 < th dose independent rect. 16 10
254 38.91 precipitation 0.1 270 < th dose dependent rect. 16 10
302 39.06 wind 9.0 270 < th dose independent rect. 2 14
315 39.09 radiation 1.0 270 > th dose independent rect. 16 22
316 39.09 wind 9.0 90 < th dose dependent rect. 17 10
321 39.10 temperature 30.0 270 < th dose dependent rect. 1 5
368 39.24 temperature 10.0 10 > th dose dependent rect. 7 21
381 39.29 radiation 20.0 43200 > th dose independent rect. 9 2
388 39.31 atmosphere 995.0 270 > th dose independent rect. 16 10
393 39.32 radiation 1.0 270 > th dose independent rect. 17 19
394 39.32 radiation 40.0 270 < th dose dependent rect. 16 10
400 39.34 radiation 20.0 43200 > th dose independent rect. 9 4
403 39.34 temperature 10.0 270 > th dose dependent rect. 18 16
410 39.37 temperature 30.0 270 < th dose dependent rect. 2 3
418 39.39 humidity 50.0 43200 < th dose dependent rect. 8 1
427 39.41 atmosphere 995.0 270 > th dose independent rect. 2 14
438 39.42 temperature 10.0 10 > th dose dependent rect. 9 18
446 39.44 temperature 20.0 90 < th dose independent sin 8 NA
450 39.45 radiation 20.0 43200 > th dose independent rect. 12 1
486 39.50 radiation 30.0 43200 < th dose dependent rect. 10 1
523 39.59 humidity 50.0 43200 > th dose dependent rect. 8 1
531 39.60 humidity 50.0 14400 > th dose independent rect. 19 10
532 39.61 temperature 20.0 10 > th dose independent rect. 22 16
533 39.61 temperature 20.0 90 > th dose independent rect. 17 21
536 39.61 radiation 1.0 270 < th dose dependent sin 5 NA
538 39.62 wind 1.0 14400 < th dose independent rect. 22 4
542 39.63 atmosphere 1015.0 270 < th dose independent rect. 17 9
563 39.67 radiation 1.0 270 < th dose independent sin 6 NA
572 39.68 wind 1.0 270 > th dose independent rect. 10 21
587 39.71 radiation 20.0 43200 < th dose dependent rect. 12 1
593 39.72 radiation 1.0 270 > th dose independent sin 4 NA
601 39.73 humidity 80.0 43200 < th dose independent rect. 5 6
605 39.74 radiation 20.0 43200 < th dose independent rect. 10 1
617 39.76 humidity 80.0 43200 > th dose independent rect. 6 4
625 39.77 humidity 70.0 43200 > th dose independent rect. 11 1
652 39.80 humidity 60.0 43200 < th dose dependent rect. 2 7
655 39.81 humidity 50.0 270 > th dose independent rect. 17 9
669 39.82 humidity 80.0 43200 < th dose independent rect. 8 1
670 39.82 wind 1.0 14400 > th dose independent rect. 22 4
672 39.82 wind 1.0 43200 > th dose independent rect. 16 10
680 39.83 temperature 15.0 270 > th dose independent rect. 6 6
689 39.84 humidity 50.0 43200 > th dose independent rect. 22 11
693 39.84 humidity 50.0 43200 > th dose dependent rect. 7 3
699 39.85 radiation 1.0 270 > th dose independent rect. 6 6
710 39.87 humidity 50.0 43200 < th dose independent rect. 4 5
718 39.88 humidity 70.0 43200 > th dose independent rect. 10 3
724 39.88 humidity 90.0 43200 < th dose dependent rect. 8 1
745 39.91 radiation 20.0 4320 < th dose independent rect. 17 15
767 39.92 wind 1.0 14400 < th dose dependent rect. 21 5
792 39.94 humidity 80.0 43200 > th dose independent rect. 7 2
823 39.95 radiation 20.0 43200 < th dose dependent rect. 8 6
829 39.96 temperature 20.0 30 > th dose independent rect. 20 8
834 39.96 humidity 70.0 43200 > th dose independent rect. 4 12
842 39.97 humidity 70.0 43200 < th dose independent rect. 11 1
853 39.98 humidity 50.0 43200 > th dose dependent rect. 4 10
863 39.99 humidity 60.0 43200 < th dose dependent rect. 13 1
866 39.99 wind 1.0 14400 < th dose dependent rect. 18 8
872 40.00 temperature 20.0 10 > th dose independent rect. 22 14
900 40.02 humidity 60.0 43200 > th dose dependent rect. 4 8
940 40.04 wind 1.0 43200 < th dose independent rect. 16 10
973 40.05 temperature 15.0 10 > th dose dependent rect. 20 18
977 40.06 radiation 20.0 4320 < th dose independent rect. 1 7
979 40.06 radiation 20.0 4320 < th dose independent rect. 21 11
982 40.07 radiation 20.0 4320 < th dose independent rect. 6 2
992 40.07 radiation 20.0 4320 < th dose independent rect. 19 13