Os06g0717700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0717700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 302.25 | 0.817 | 3.15 | -0.163 | 0.0536 | 24.3 | 0.965 | -86.6 | -0.19 | 12 | 0.471 | 78 | -- | -- |
| 320.61 | 0.84 | 3.03 | 0.318 | 0.0477 | -0.43 | 0.953 | -- | -0.202 | 12.8 | 0.471 | 78 | -- | -- |
| 306.26 | 0.815 | 3.15 | -0.125 | 0.0552 | 24.3 | -- | -86.6 | -0.186 | 10.3 | 0.4662 | 78 | -- | -- |
| 309.17 | 0.819 | 3.04 | 0.259 | 0.00398 | 2.88 | -- | -- | -0.26 | 15.3 | 1.5 | 155 | -- | -- |
| 306.44 | 0.815 | 3.15 | -0.124 | -- | 24.2 | -- | -86.5 | -0.185 | -- | 0.463 | 78 | -- | -- |
| 320.79 | 0.84 | 3.03 | 0.313 | 0.05 | -- | 0.966 | -- | -0.201 | 12.8 | -- | -- | -- | -- |
| 324.74 | 0.844 | 3.02 | 0.349 | 0.048 | -- | -- | -- | -0.196 | 12.9 | -- | -- | -- | -- |
| 307.75 | 0.817 | 3.02 | 0.304 | -- | 3.8 | -- | -- | -0.187 | -- | 1.5 | 129 | -- | -- |
| 310.17 | 0.82 | 3.03 | -- | 0.00488 | 3.89 | -- | -- | -0.22 | 3.75 | 1.5 | 141 | -- | -- |
| 324.88 | 0.842 | 3.03 | 0.347 | -- | -- | -- | -- | -0.197 | -- | -- | -- | -- | -- |
| 327.95 | 0.847 | 3.03 | -- | 0.0426 | -- | -- | -- | -0.235 | 12.5 | -- | -- | -- | -- |
| 310.17 | 0.82 | 3.03 | -- | -- | 3.87 | -- | -- | -0.22 | -- | 1.5 | 141 | -- | -- |
| 328.06 | 0.845 | 3.03 | -- | -- | -- | -- | -- | -0.235 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 287.74 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 2 | 288.69 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 16 | 2 |
| 11 | 297.37 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 7 | 11 |
| 15 | 297.37 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 7 | 11 |
| 27 | 297.71 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 17 | 2 |
| 28 | 297.73 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 4 |
| 29 | 297.74 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 17 | 2 |
| 32 | 297.78 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 13 | 5 |
| 44 | 297.78 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 13 | 5 |
| 58 | 297.88 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 88 | 297.88 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 159 | 299.95 | atmosphere | 1010.0 | 720 | > th | dose independent | rect. | 3 | 1 |
| 172 | 300.86 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 15 |
| 174 | 300.86 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 15 |
| 194 | 300.93 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 9 |
| 195 | 300.94 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 10 | 1 |
| 204 | 301.07 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 5 |
| 214 | 301.07 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 5 |
| 333 | 301.30 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 17 | 1 |
| 361 | 301.74 | precipitation | 0.1 | 10 | > th | dose independent | sin | 20 | NA |
| 362 | 301.74 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 20 | NA |
| 378 | 301.96 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 9 | 3 |
| 386 | 302.05 | wind | 1.0 | 270 | < th | dose dependent | rect. | 20 | 3 |
| 390 | 302.21 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 9 | 4 |
| 413 | 302.48 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 20 | NA |
| 424 | 302.59 | temperature | 20.0 | 90 | < th | dose independent | rect. | 9 | 4 |
| 431 | 302.78 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 5 | 11 |
| 461 | 303.17 | wind | 1.0 | 270 | < th | dose independent | rect. | 21 | 2 |
| 468 | 303.18 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 20 | 22 |
| 501 | 303.31 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 10 | 2 |
| 503 | 303.37 | atmosphere | 1010.0 | 270 | > th | dose independent | sin | 1 | NA |
| 556 | 303.48 | temperature | 20.0 | 10 | < th | dose independent | rect. | 10 | 2 |
| 558 | 303.49 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 19 |
| 564 | 303.61 | precipitation | 0.1 | 10 | < th | dose independent | sin | 21 | NA |
| 565 | 303.61 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 21 | NA |
| 588 | 303.72 | atmosphere | 1010.0 | 270 | < th | dose independent | sin | 2 | NA |
| 683 | 304.68 | temperature | 15.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 684 | 304.68 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 701 | 304.82 | humidity | 90.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 703 | 304.82 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 10 | 1 |
| 731 | 304.82 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 733 | 304.82 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 775 | 305.01 | atmosphere | 1010.0 | 720 | < th | dose independent | rect. | 3 | 6 |
| 777 | 305.05 | atmosphere | 1010.0 | 720 | < th | dose independent | rect. | 1 | 8 |
| 830 | 305.47 | precipitation | 0.1 | 90 | > th | dose independent | sin | 21 | NA |
| 840 | 305.51 | atmosphere | 1010.0 | 720 | < th | dose independent | rect. | 23 | 8 |
| 854 | 305.61 | atmosphere | 1010.0 | 720 | < th | dose independent | rect. | 23 | 10 |
| 858 | 305.67 | wind | 5.0 | 90 | > th | dose independent | rect. | 17 | 1 |
| 935 | 306.12 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 10 | 4 |
| 941 | 306.15 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 16 |