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Os06g0716700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Endoplasmin homolog precursor (GRP94 homolog).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.4 (0.0263) R2 : 0.406
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.56 (0.11) R2dE : 0.287 R2E : 0.339
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.352 (0.0571) R2dN8 : 0.0676 R2N8 : 0.12
σ : 0.49
deviance : 110.87
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 18.3
memory length : 7951
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
107.4 0.487 13.5 -0.319 0.0593 0.968 -0.511 -1.89 0.238 22.9 20.1 3513 -- --
107.44 0.483 13.4 -0.408 0.0646 1.78 -0.541 -- 0.252 23 18.68 8014 -- --
108.34 0.485 13.5 -0.322 0.0508 0.98 -- -1.91 0.234 22.7 20 3759 -- --
108.62 0.485 13.4 -0.399 0.0695 1.8 -- -- 0.251 0.294 18.7 8014 -- --
108.49 0.485 13.5 -0.326 -- 0.971 -- -1.96 0.23 -- 20.03 3759 -- --
143.44 0.561 13.3 0.734 0.1 -- -0.552 -- 0.651 23.6 -- -- -- --
144.73 0.563 13.3 0.755 0.105 -- -- -- 0.652 0.454 -- -- -- --
108.92 0.486 13.4 -0.391 -- 1.8 -- -- 0.253 -- 18.67 8014 -- --
110.67 0.49 13.4 -- 0.0595 1.58 -- -- 0.341 21.6 18.3 8011 -- --
145.42 0.563 13.3 0.759 -- -- -- -- 0.654 -- -- -- -- --
159.77 0.591 13.3 -- 0.117 -- -- -- 0.568 0.782 -- -- -- --
110.87 0.49 13.4 -- -- 1.56 -- -- 0.352 -- 18.3 7951 -- --
160.62 0.592 13.3 -- -- -- -- -- 0.57 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 98.32 humidity 90.0 14400 > th dose dependent rect. 6 1
4 99.77 humidity 90.0 14400 < th dose independent rect. 6 1
5 100.04 humidity 90.0 14400 > th dose independent rect. 5 2
9 100.94 humidity 90.0 14400 > th dose dependent rect. 3 12
13 101.23 humidity 80.0 14400 > th dose dependent rect. 2 6
14 101.32 humidity 90.0 14400 > th dose dependent sin 3 NA
33 101.85 humidity 80.0 14400 > th dose dependent rect. 23 10
80 102.90 humidity 50.0 14400 > th dose dependent rect. 5 2
100 103.30 wind 7.0 43200 < th dose dependent rect. 22 2
109 103.40 humidity 90.0 14400 > th dose independent rect. 1 14
111 103.46 humidity 90.0 14400 > th dose independent rect. 23 17
114 103.49 temperature 20.0 4320 > th dose independent rect. 20 2
116 103.51 humidity 80.0 14400 > th dose dependent sin 7 NA
130 103.72 radiation 1.0 14400 > th dose independent rect. 6 2
134 103.74 radiation 1.0 14400 < th dose independent rect. 6 2
135 103.74 wind 1.0 43200 > th dose dependent rect. 22 1
139 103.77 precipitation 0.1 43200 > th dose dependent rect. 2 6
149 103.87 precipitation 0.1 43200 > th dose independent rect. 2 6
152 103.90 humidity 90.0 14400 < th dose independent rect. 23 17
155 103.92 precipitation 0.1 43200 < th dose independent rect. 2 6
156 103.92 precipitation 0.1 43200 < th dose dependent rect. 2 6
199 104.41 humidity 60.0 43200 < th dose independent rect. 20 13
204 104.43 humidity 60.0 43200 > th dose independent rect. 20 13
238 104.67 radiation 1.0 14400 > th dose independent rect. 4 8
254 104.72 radiation 1.0 14400 < th dose independent rect. 4 8
262 104.73 radiation 1.0 14400 < th dose independent rect. 19 17
299 104.92 wind 3.0 43200 > th dose independent rect. 23 1
304 104.94 humidity 90.0 14400 > th dose independent sin 4 NA
322 104.99 radiation 1.0 14400 > th dose independent rect. 6 6
334 105.01 humidity 50.0 43200 > th dose dependent rect. 21 1
336 105.02 humidity 60.0 43200 < th dose independent rect. 6 3
337 105.02 radiation 1.0 14400 > th dose independent rect. 4 5
369 105.07 radiation 1.0 14400 < th dose independent rect. 6 6
384 105.08 radiation 1.0 14400 > th dose independent sin 7 NA
402 105.11 temperature 20.0 1440 < th dose independent rect. 5 2
423 105.15 radiation 1.0 14400 < th dose independent sin 7 NA
441 105.21 temperature 20.0 4320 < th dose independent rect. 19 4
442 105.21 humidity 80.0 14400 > th dose dependent rect. 23 1
444 105.22 humidity 90.0 43200 < th dose dependent rect. 21 1
449 105.26 humidity 60.0 43200 < th dose dependent rect. 20 14
453 105.28 precipitation 0.1 43200 > th dose dependent rect. 23 9
462 105.31 temperature 20.0 4320 < th dose independent rect. 20 2
463 105.31 temperature 20.0 1440 > th dose independent rect. 5 3
480 105.36 humidity 90.0 43200 < th dose dependent rect. 19 3
499 105.41 temperature 20.0 4320 < th dose independent rect. 18 6
503 105.43 precipitation 0.1 43200 > th dose independent rect. 23 9
517 105.48 humidity 60.0 43200 > th dose independent rect. 6 3
530 105.49 precipitation 0.1 43200 < th dose independent rect. 23 9
531 105.49 precipitation 0.1 43200 < th dose dependent rect. 23 9
567 105.61 humidity 70.0 43200 < th dose independent rect. 15 18
568 105.61 radiation 20.0 4320 > th dose dependent rect. 16 16
574 105.64 humidity 90.0 43200 < th dose dependent rect. 18 6
596 105.68 humidity 90.0 14400 > th dose dependent rect. 5 23
618 105.74 humidity 70.0 43200 < th dose independent rect. 16 9
629 105.76 wind 5.0 43200 < th dose independent rect. 23 1
631 105.77 humidity 90.0 14400 < th dose independent sin 5 NA
635 105.77 humidity 60.0 43200 < th dose dependent rect. 6 3
636 105.77 humidity 90.0 43200 < th dose dependent rect. 17 8
641 105.79 humidity 70.0 43200 < th dose dependent rect. 7 1
652 105.82 humidity 90.0 14400 > th dose dependent no NA NA
704 105.89 precipitation 0.1 43200 > th dose dependent rect. 5 3
716 105.91 humidity 90.0 14400 > th dose dependent rect. 9 23
719 105.92 humidity 70.0 43200 > th dose independent rect. 15 18
734 105.95 humidity 60.0 43200 > th dose independent rect. 2 7
744 105.97 precipitation 0.1 43200 > th dose independent rect. 5 3
748 105.97 humidity 80.0 43200 < th dose dependent rect. 14 19
749 105.98 humidity 70.0 43200 < th dose independent rect. 19 1
766 106.02 humidity 50.0 43200 > th dose dependent rect. 18 6
770 106.03 humidity 60.0 14400 > th dose dependent rect. 23 1
779 106.03 humidity 90.0 14400 > th dose dependent rect. 14 23
791 106.05 wind 3.0 43200 > th dose independent rect. 19 5
803 106.07 humidity 70.0 43200 > th dose independent rect. 18 4
821 106.09 humidity 80.0 43200 < th dose dependent sin 15 NA
836 106.12 humidity 70.0 43200 < th dose independent sin 14 NA
852 106.14 precipitation 0.1 43200 < th dose independent rect. 5 3
853 106.14 wind 3.0 43200 < th dose independent rect. 19 5
856 106.14 precipitation 0.1 43200 < th dose dependent rect. 5 3
871 106.15 humidity 70.0 43200 > th dose independent rect. 16 9
876 106.16 wind 7.0 43200 > th dose independent rect. 18 1
890 106.18 humidity 70.0 43200 > th dose independent rect. 19 1
908 106.20 humidity 70.0 43200 > th dose independent rect. 17 7
933 106.24 humidity 80.0 43200 < th dose dependent rect. 6 19
989 106.30 humidity 70.0 43200 < th dose independent rect. 18 3