Os06g0714900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os06g0714900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.11 | 0.367 | 10.2 | -0.639 | 1.48 | 0.204 | 0.251 | 1.35 | 0.0421 | 15.3 | 1014 | 5458 | -- | -- |
| 65.67 | 0.377 | 10.3 | -0.918 | 1.45 | 0.207 | 0.146 | -- | -0.0551 | 15.2 | 1014 | 11452 | -- | -- |
| 60.93 | 0.364 | 10.2 | -0.608 | 1.48 | 0.15 | -- | 1.39 | 0.0563 | 15.3 | 1013 | 4830 | -- | -- |
| 65.58 | 0.377 | 10.3 | -0.966 | 1.47 | 0.197 | -- | -- | -0.0465 | 15.3 | 1014 | 7890 | -- | -- |
| 184.81 | 0.633 | 10.2 | -0.645 | -- | 0.0974 | -- | 1.42 | 0.0273 | -- | 1013 | 4907 | -- | -- |
| 67.18 | 0.384 | 10.2 | -0.888 | 1.48 | -- | 0.224 | -- | 0.00453 | 15.3 | -- | -- | -- | -- |
| 67.34 | 0.384 | 10.2 | -0.884 | 1.48 | -- | -- | -- | 0.00586 | 15.3 | -- | -- | -- | -- |
| 189.73 | 0.642 | 10.2 | -1.03 | -- | 0.193 | -- | -- | -0.0703 | -- | 1014 | 7867 | -- | -- |
| 79.58 | 0.415 | 10.2 | -- | 1.48 | -0.454 | -- | -- | 0.235 | 15.3 | 1010 | 47520 | -- | -- |
| 191.5 | 0.647 | 10.2 | -0.947 | -- | -- | -- | -- | -0.0331 | -- | -- | -- | -- | -- |
| 87.94 | 0.439 | 10.2 | -- | 1.5 | -- | -- | -- | 0.104 | 15.3 | -- | -- | -- | -- |
| 202.28 | 0.662 | 10.2 | -- | -- | -0.571 | -- | -- | 0.223 | -- | 1013 | 47520 | -- | -- |
| 215.15 | 0.685 | 10.2 | -- | -- | -- | -- | -- | 0.0719 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.71 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 14 | 8 |
| 3 | 59.85 | wind | 5.0 | 270 | < th | dose independent | rect. | 14 | 7 |
| 4 | 59.95 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 18 |
| 5 | 59.96 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 12 | 60.26 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 16 |
| 14 | 60.32 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 18 |
| 18 | 60.40 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 14 | 7 |
| 20 | 60.42 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 16 | 7 |
| 25 | 60.45 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 15 |
| 27 | 60.48 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 23 | 6 |
| 32 | 60.51 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 13 | 23 |
| 40 | 60.57 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 14 | 21 |
| 44 | 60.61 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 15 |
| 52 | 60.65 | wind | 9.0 | 270 | < th | dose dependent | rect. | 14 | 7 |
| 53 | 60.65 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 18 |
| 70 | 60.78 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 19 | 15 |
| 73 | 60.85 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 13 |
| 78 | 60.88 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 94 | 60.98 | radiation | 1.0 | 10 | < th | dose independent | rect. | 23 | 13 |
| 96 | 60.99 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 99 | 60.99 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 23 | 9 |
| 108 | 61.01 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 110 | 61.01 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 7 |
| 116 | 61.04 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 19 | 15 |
| 119 | 61.05 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 120 | 61.06 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 122 | 61.06 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 124 | 61.07 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 129 | 61.10 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 132 | 61.11 | humidity | 50.0 | 270 | > th | dose independent | rect. | 10 | 17 |
| 135 | 61.13 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 18 |
| 137 | 61.14 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 9 |
| 145 | 61.15 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 7 |
| 149 | 61.15 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 21 | 20 |
| 152 | 61.17 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 8 |
| 159 | 61.19 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 20 | 12 |
| 161 | 61.20 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 20 | 14 |
| 166 | 61.21 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 14 |
| 171 | 61.22 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 22 |
| 180 | 61.25 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 20 | 14 |
| 183 | 61.26 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 6 |
| 184 | 61.26 | temperature | 30.0 | 30 | < th | dose independent | rect. | 23 | 6 |
| 185 | 61.26 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 6 |
| 188 | 61.26 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 6 |
| 189 | 61.26 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 6 |
| 201 | 61.26 | wind | 7.0 | 270 | < th | dose independent | rect. | 16 | 16 |
| 205 | 61.26 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 207 | 61.26 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 18 |
| 219 | 61.27 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 225 | 61.27 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 2 | 8 |
| 228 | 61.28 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 6 |
| 233 | 61.28 | wind | 5.0 | 30 | < th | dose independent | rect. | 5 | 18 |
| 237 | 61.29 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 251 | 61.29 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 2 | 5 |
| 263 | 61.30 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 18 |
| 269 | 61.31 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 6 |
| 274 | 61.31 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 276 | 61.31 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 6 |
| 287 | 61.33 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 313 | 61.34 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 3 | 2 |
| 316 | 61.35 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 8 | NA |
| 322 | 61.35 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 17 | 22 |
| 336 | 61.36 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 18 |
| 342 | 61.36 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 19 | 17 |
| 344 | 61.37 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 418 | 61.40 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 419 | 61.40 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 458 | 61.42 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 9 | 3 |
| 471 | 61.43 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 474 | 61.43 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 7 | 5 |
| 499 | 61.44 | temperature | 25.0 | 90 | > th | dose dependent | sin | 11 | NA |
| 506 | 61.45 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 1 | 10 |
| 521 | 61.45 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 538 | 61.46 | humidity | 50.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 542 | 61.46 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 569 | 61.47 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 1 | 10 |
| 602 | 61.48 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 11 | 11 |
| 606 | 61.48 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 11 | 15 |
| 615 | 61.48 | radiation | 1.0 | 30 | < th | dose independent | rect. | 21 | 20 |
| 620 | 61.48 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 630 | 61.49 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 632 | 61.49 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 700 | 61.51 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 9 | 6 |
| 711 | 61.51 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 20 |
| 722 | 61.52 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 737 | 61.52 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 18 |
| 746 | 61.52 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 18 |
| 896 | 61.56 | humidity | 50.0 | 14400 | > th | dose independent | no | NA | NA |
| 900 | 61.56 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 911 | 61.56 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 2 | 8 |