Os06g0713300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0713300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.63 | 0.417 | 7.39 | -2.05 | 1.17 | -1.21 | -0.127 | 0.74 | 0.158 | 6.68 | 23 | 864 | -- | -- |
| 79.33 | 0.415 | 7.38 | -1.98 | 1.18 | -1.34 | -0.00874 | -- | 0.161 | 6.69 | 23.06 | 870 | -- | -- |
| 78.67 | 0.413 | 7.39 | -2.05 | 1.17 | -1.21 | -- | 0.724 | 0.159 | 6.68 | 23 | 863 | -- | -- |
| 79.29 | 0.415 | 7.37 | -1.95 | 1.18 | -1.34 | -- | -- | 0.174 | 6.7 | 22.96 | 860 | -- | -- |
| 143.18 | 0.557 | 7.42 | -2.07 | -- | -1.25 | -- | 0.847 | 0.152 | -- | 22.8 | 1282 | -- | -- |
| 101.23 | 0.472 | 7.33 | -1.6 | 1.13 | -- | -0.0514 | -- | 0.386 | 6.26 | -- | -- | -- | -- |
| 101.24 | 0.471 | 7.33 | -1.6 | 1.13 | -- | -- | -- | 0.386 | 6.26 | -- | -- | -- | -- |
| 143.6 | 0.558 | 7.4 | -1.99 | -- | -1.49 | -- | -- | 0.176 | -- | 22.8 | 1340 | -- | -- |
| 166.37 | 0.601 | 7.3 | -- | 1.13 | -0.396 | -- | -- | 0.514 | 6.4 | 23 | 536 | -- | -- |
| 167.13 | 0.604 | 7.35 | -1.57 | -- | -- | -- | -- | 0.41 | -- | -- | -- | -- | -- |
| 168.56 | 0.607 | 7.29 | -- | 1.1 | -- | -- | -- | 0.564 | 6.34 | -- | -- | -- | -- |
| 229.74 | 0.706 | 7.3 | -- | -- | -0.686 | -- | -- | 0.574 | -- | 17.9 | 1149 | -- | -- |
| 231.96 | 0.711 | 7.31 | -- | -- | -- | -- | -- | 0.584 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.51 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 4 | 75.57 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 5 | 75.58 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 11 | 76.26 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 12 | 76.31 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 14 | 76.33 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 15 | 76.37 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 18 | 76.63 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 25 | 76.91 | wind | 9.0 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 28 | 77.08 | wind | 9.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 31 | 77.18 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 32 | 77.21 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 12 | 7 |
| 36 | 77.23 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 37 | 77.26 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 42 | 77.28 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 11 | 10 |
| 48 | 77.35 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 11 | 8 |
| 66 | 77.53 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 95 | 77.83 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 12 | 3 |
| 100 | 77.88 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 126 | 78.11 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 127 | 78.11 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 130 | 78.14 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 138 | 78.22 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 146 | 78.28 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 148 | 78.31 | wind | 9.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 177 | 78.49 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 185 | 78.53 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 192 | 78.56 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 194 | 78.56 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 201 | 78.59 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 203 | 78.60 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 208 | 78.63 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 216 | 78.66 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 229 | 78.73 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 232 | 78.73 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 249 | 78.74 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 2 | 5 |
| 263 | 78.80 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 265 | 78.81 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 286 | 78.82 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 2 | 5 |
| 288 | 78.83 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 289 | 78.83 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 295 | 78.85 | wind | 9.0 | 43200 | > th | dose independent | rect. | 4 | 13 |
| 303 | 78.86 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 4 |
| 328 | 78.93 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 6 |
| 339 | 78.97 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 3 | 4 |
| 350 | 79.01 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 369 | 79.08 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 19 |
| 390 | 79.13 | wind | 9.0 | 43200 | > th | dose independent | rect. | 7 | 10 |
| 394 | 79.14 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 420 | 79.19 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 7 |
| 429 | 79.22 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 431 | 79.22 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 19 | NA |
| 438 | 79.23 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 471 | 79.31 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 499 | 79.36 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 511 | 79.38 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 525 | 79.40 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 532 | 79.41 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 558 | 79.45 | wind | 9.0 | 43200 | < th | dose independent | rect. | 2 | 15 |
| 564 | 79.46 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 571 | 79.47 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 583 | 79.50 | atmosphere | 1015.0 | 14400 | < th | dose independent | sin | 19 | NA |
| 589 | 79.51 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 590 | 79.51 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 620 | 79.56 | atmosphere | 1015.0 | 14400 | > th | dose independent | sin | 19 | NA |
| 637 | 79.59 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 646 | 79.60 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 660 | 79.63 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 680 | 79.66 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 19 | 5 |
| 714 | 79.70 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 17 | 9 |
| 732 | 79.71 | wind | 9.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 735 | 79.71 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 24 | 14 |
| 737 | 79.72 | wind | 9.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 738 | 79.72 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 742 | 79.72 | wind | 9.0 | 14400 | > th | dose independent | rect. | 19 | 19 |
| 752 | 79.73 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 794 | 79.78 | wind | 1.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 817 | 79.80 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 834 | 79.81 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 22 |
| 839 | 79.82 | temperature | 20.0 | 4320 | < th | dose dependent | sin | 7 | NA |
| 850 | 79.83 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 871 | 79.84 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 4 |
| 923 | 79.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 930 | 79.90 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 935 | 79.91 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 16 | 5 |