Os06g0712800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ankyrin-like protein.
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Os06g0712800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ankyrin-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.11 | 0.402 | 3.68 | -0.639 | 1.12 | 0.816 | 0.152 | -0.942 | -0.0931 | 4.58 | 23.51 | 1165 | -- | -- |
| 73.58 | 0.4 | 3.66 | -0.373 | 1.11 | 0.742 | 0.0856 | -- | -0.0209 | 4.6 | 23.72 | 1163 | -- | -- |
| 73.03 | 0.398 | 3.68 | -0.645 | 1.12 | 0.824 | -- | -1.02 | -0.0761 | 4.6 | 24 | 1151 | -- | -- |
| 73.56 | 0.399 | 3.65 | -0.393 | 1.12 | 0.743 | -- | -- | -0.0227 | 4.57 | 23.75 | 1160 | -- | -- |
| 137.83 | 0.547 | 3.69 | -0.658 | -- | 1.04 | -- | -0.95 | -0.0811 | -- | 24 | 1205 | -- | -- |
| 90.15 | 0.445 | 3.62 | -0.161 | 1.21 | -- | 0.18 | -- | 0.101 | 4.18 | -- | -- | -- | -- |
| 90.24 | 0.445 | 3.62 | -0.163 | 1.21 | -- | -- | -- | 0.1 | 4.17 | -- | -- | -- | -- |
| 138.44 | 0.548 | 3.66 | -0.418 | -- | 0.936 | -- | -- | -0.0187 | -- | 23.93 | 1213 | -- | -- |
| 77.23 | 0.409 | 3.64 | -- | 1.13 | 0.636 | -- | -- | 0.0378 | 4.49 | 23.99 | 1161 | -- | -- |
| 169.43 | 0.608 | 3.63 | -0.115 | -- | -- | -- | -- | 0.132 | -- | -- | -- | -- | -- |
| 90.94 | 0.446 | 3.62 | -- | 1.21 | -- | -- | -- | 0.118 | 4.17 | -- | -- | -- | -- |
| 142.71 | 0.556 | 3.65 | -- | -- | 0.845 | -- | -- | 0.0416 | -- | 24 | 1207 | -- | -- |
| 169.78 | 0.608 | 3.63 | -- | -- | -- | -- | -- | 0.145 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.63 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 2 | 63.15 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 3 |
| 3 | 63.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 5 | 64.13 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 12 | 64.94 | temperature | 20 | 10 | > th | dose independent | rect. | 3 | 3 |
| 17 | 65.10 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 27 | 65.73 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 40 | 66.21 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 8 |
| 100 | 67.41 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 7 |
| 172 | 68.59 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 174 | 68.62 | temperature | 25 | 720 | < th | dose independent | rect. | 16 | 9 |
| 185 | 68.74 | wind | 3 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 192 | 68.88 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 198 | 68.94 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 6 |
| 238 | 69.13 | temperature | 20 | 720 | > th | dose dependent | sin | 14 | NA |
| 239 | 69.13 | wind | 3 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 283 | 69.60 | humidity | 70 | 720 | < th | dose independent | rect. | 19 | 1 |
| 295 | 69.61 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 16 |
| 312 | 69.91 | humidity | 70 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 343 | 70.11 | temperature | 10 | 720 | > th | dose dependent | sin | 14 | NA |
| 364 | 70.25 | temperature | 20 | 10 | > th | dose independent | rect. | 24 | 7 |
| 367 | 70.30 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 8 |
| 378 | 70.39 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 419 | 70.65 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 16 |
| 463 | 70.86 | temperature | 25 | 720 | < th | dose independent | sin | 16 | NA |
| 471 | 70.91 | humidity | 90 | 90 | > th | dose independent | rect. | 4 | 1 |
| 492 | 71.04 | temperature | 25 | 720 | > th | dose independent | sin | 16 | NA |
| 515 | 71.20 | humidity | 80 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 527 | 71.24 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 555 | 71.37 | wind | 1 | 30 | < th | dose independent | rect. | 3 | 4 |
| 607 | 71.57 | temperature | 20 | 30 | > th | dose independent | rect. | 13 | 17 |
| 679 | 71.92 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 710 | 72.05 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 717 | 72.09 | temperature | 20 | 270 | > th | dose independent | rect. | 24 | 21 |
| 775 | 72.24 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 18 |
| 806 | 72.35 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 856 | 72.53 | wind | 3 | 270 | < th | dose independent | rect. | 23 | 6 |
| 895 | 72.63 | humidity | 80 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 905 | 72.67 | temperature | 20 | 270 | > th | dose independent | rect. | 10 | 20 |
| 945 | 72.79 | temperature | 25 | 270 | < th | dose dependent | rect. | 18 | 15 |
| 956 | 72.87 | temperature | 25 | 270 | < th | dose dependent | sin | 11 | NA |
| 963 | 72.90 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 981 | 72.95 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 994 | 72.96 | wind | 1 | 30 | < th | dose independent | rect. | 24 | 7 |