Os06g0712500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glycosyltransferase QUASIMODO1 (EC 2.4.1.-).
FiT-DB / Search/ Help/ Sample detail
|
Os06g0712500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Glycosyltransferase QUASIMODO1 (EC 2.4.1.-).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.62 | 0.452 | 7.8 | -1.09 | 0.547 | 1.06 | -0.576 | -0.638 | -0.138 | 18.1 | 25.57 | 1211 | -- | -- |
| 92.48 | 0.448 | 7.78 | -0.932 | 0.507 | 1.1 | -0.714 | -- | -0.136 | 17.7 | 24.83 | 1100 | -- | -- |
| 93.33 | 0.45 | 7.79 | -1.06 | 0.549 | 1.04 | -- | -0.55 | -0.133 | 18.4 | 25.6 | 1221 | -- | -- |
| 93.43 | 0.45 | 7.78 | -0.928 | 0.551 | 0.984 | -- | -- | -0.1 | 18.4 | 25.59 | 1220 | -- | -- |
| 97.6 | 0.46 | 7.8 | -1.08 | -- | 1.35 | -- | -0.659 | -0.239 | -- | 23.49 | 773 | -- | -- |
| 129.56 | 0.534 | 7.76 | -0.62 | 0.55 | -- | -0.169 | -- | -0.0207 | 19.6 | -- | -- | -- | -- |
| 129.62 | 0.533 | 7.76 | -0.617 | 0.549 | -- | -- | -- | -0.0214 | 19.7 | -- | -- | -- | -- |
| 97.86 | 0.461 | 7.79 | -0.944 | -- | 1.3 | -- | -- | -0.202 | -- | 23.5 | 777 | -- | -- |
| 113.83 | 0.497 | 7.73 | -- | 0.56 | 0.744 | -- | -- | 0.133 | 18.8 | 28.26 | 1243 | -- | -- |
| 145.87 | 0.564 | 7.75 | -0.624 | -- | -- | -- | -- | -0.0293 | -- | -- | -- | -- | -- |
| 139.64 | 0.553 | 7.75 | -- | 0.554 | -- | -- | -- | 0.0473 | 19.6 | -- | -- | -- | -- |
| 119.51 | 0.509 | 7.75 | -- | -- | 1.11 | -- | -- | -0.02 | -- | 24.9 | 777 | -- | -- |
| 156.13 | 0.583 | 7.73 | -- | -- | -- | -- | -- | 0.0399 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.28 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 12 | 94.35 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 11 |
| 20 | 94.41 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 37 | 94.54 | temperature | 25 | 1440 | > th | dose dependent | sin | 1 | NA |
| 78 | 94.68 | temperature | 25 | 1440 | > th | dose dependent | rect. | 22 | 19 |
| 98 | 94.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 145 | 94.88 | temperature | 25 | 720 | > th | dose dependent | sin | 16 | NA |
| 172 | 94.94 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 174 | 94.95 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 190 | 95.03 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 221 | 95.13 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 242 | 95.20 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 244 | 95.23 | temperature | 25 | 720 | > th | dose dependent | rect. | 12 | 12 |
| 306 | 95.48 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 332 | 95.57 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 338 | 95.59 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 344 | 95.59 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 19 |
| 364 | 95.62 | temperature | 30 | 1440 | < th | dose independent | sin | 1 | NA |
| 372 | 95.64 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 373 | 95.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 429 | 95.73 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 14 |
| 432 | 95.74 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 10 |
| 434 | 95.74 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 19 |
| 442 | 95.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 16 |
| 444 | 95.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 467 | 95.76 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 468 | 95.76 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 13 |
| 493 | 95.76 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 22 |
| 499 | 95.76 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 527 | 95.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 548 | 95.78 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 611 | 95.84 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 655 | 95.95 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 694 | 95.98 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 702 | 95.99 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 721 | 96.03 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 761 | 96.11 | temperature | 30 | 1440 | > th | dose independent | sin | 0 | NA |
| 783 | 96.15 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 905 | 96.22 | temperature | 25 | 720 | > th | dose dependent | sin | 11 | NA |