Os06g0711000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0711000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 250.81 | 0.744 | 6.19 | 4.99 | 0.933 | 1.77 | -0.266 | -1.55 | 0.431 | 1.21 | 19.57 | 48 | -- | -- |
| 252.35 | 0.74 | 6.16 | 5.26 | 0.948 | 1.75 | 0.14 | -- | 0.496 | 1.14 | 19 | 30 | -- | -- |
| 251 | 0.738 | 6.19 | 5.05 | 0.935 | 1.77 | -- | -1.27 | 0.442 | 1.26 | 19.56 | 47 | -- | -- |
| 252.39 | 0.74 | 6.16 | 5.26 | 0.93 | 1.72 | -- | -- | 0.508 | 1.21 | 19 | 44 | -- | -- |
| 271.52 | 0.767 | 6.16 | 5.08 | -- | 1.5 | -- | -1.07 | 0.523 | -- | 1.399 | 709 | -- | -- |
| 294.59 | 0.805 | 6.1 | 5.62 | 0.433 | -- | -0.352 | -- | 0.795 | 22.8 | -- | -- | -- | -- |
| 295.1 | 0.804 | 6.1 | 5.64 | 0.434 | -- | -- | -- | 0.796 | 23 | -- | -- | -- | -- |
| 272.43 | 0.769 | 6.14 | 5.27 | -- | 1.48 | -- | -- | 0.573 | -- | 7.206 | 744 | -- | -- |
| 901.55 | 1.4 | 6.36 | -- | 1.66 | 4.6 | -- | -- | -0.376 | 2.16 | 13.49 | 80 | -- | -- |
| 306.83 | 0.818 | 6.08 | 5.65 | -- | -- | -- | -- | 0.799 | -- | -- | -- | -- | -- |
| 1132.87 | 1.57 | 6.24 | -- | 0.493 | -- | -- | -- | 0.168 | 23.8 | -- | -- | -- | -- |
| 438.59 | 0.975 | 6.52 | -- | -- | 4.28 | -- | -- | -1.11 | -- | -9.51 | 47520 | -- | -- |
| 1148.19 | 1.58 | 6.23 | -- | -- | -- | -- | -- | 0.173 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 248.33 | temperature | 30 | 30 | < th | dose dependent | rect. | 18 | 23 |
| 2 | 248.49 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 22 |
| 3 | 248.53 | temperature | 30 | 4320 | < th | dose independent | rect. | 23 | 10 |
| 7 | 249.06 | temperature | 20 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 8 | 249.14 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 23 | 249.20 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 31 | 249.89 | temperature | 30 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 58 | 250.87 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 64 | 251.17 | temperature | 20 | 30 | > th | dose dependent | no | NA | NA |
| 65 | 251.21 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 72 | 251.52 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 18 |
| 80 | 251.96 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 87 | 252.16 | temperature | 30 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 114 | 252.78 | temperature | 30 | 4320 | < th | dose independent | rect. | 2 | 7 |
| 121 | 253.05 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 170 | 253.76 | temperature | 25 | 90 | < th | dose independent | rect. | 21 | 17 |
| 182 | 253.88 | temperature | 25 | 90 | < th | dose independent | rect. | 19 | 20 |
| 193 | 254.09 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 19 |
| 196 | 254.17 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 199 | 254.20 | temperature | 20 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 233 | 254.58 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 276 | 255.33 | temperature | 25 | 10 | < th | dose independent | rect. | 19 | 20 |
| 295 | 255.62 | temperature | 25 | 10 | < th | dose independent | rect. | 22 | 16 |
| 374 | 256.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 375 | 256.43 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 400 | 256.67 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 16 |
| 407 | 256.79 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 409 | 256.80 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 410 | 256.80 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 418 | 256.86 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 441 | 257.11 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 480 | 257.22 | temperature | 25 | 270 | < th | dose independent | rect. | 5 | 22 |
| 501 | 257.41 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 517 | 257.50 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 531 | 257.64 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 557 | 257.79 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 640 | 258.49 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 660 | 258.68 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 670 | 258.80 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 764 | 259.56 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 816 | 259.87 | wind | 1 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 843 | 260.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 852 | 260.10 | temperature | 20 | 10 | > th | dose dependent | sin | 7 | NA |
| 955 | 260.90 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 961 | 260.98 | temperature | 25 | 270 | > th | dose independent | rect. | 13 | 22 |
| 990 | 261.07 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 991 | 261.08 | temperature | 30 | 1440 | > th | dose independent | sin | 7 | NA |
| 997 | 261.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 21 |
| 1000 | 261.11 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 3 |