Os06g0710900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0710900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.46 | 0.514 | 11.3 | 1.87 | 1.5 | -0.529 | -0.669 | 1.98 | 0.604 | 20.3 | 22.96 | 120 | -- | -- |
| 121.43 | 0.513 | 11.3 | 1.98 | 1.46 | -1.35 | -0.642 | -- | 0.672 | 20.2 | 19.93 | 193 | -- | -- |
| 120.74 | 0.512 | 11.3 | 1.9 | 1.5 | -0.561 | -- | 1.9 | 0.617 | 20.3 | 22.56 | 133 | -- | -- |
| 122.36 | 0.515 | 11.3 | 2.01 | 1.48 | -1.42 | -- | -- | 0.654 | 20.3 | 19.99 | 202 | -- | -- |
| 220.45 | 0.692 | 11.3 | 1.44 | -- | -1.46 | -- | 2.91 | 0.392 | -- | 84.3 | 524 | -- | -- |
| 133.03 | 0.541 | 11.3 | 2.25 | 1.49 | -- | -0.596 | -- | 0.744 | 20.1 | -- | -- | -- | -- |
| 134.03 | 0.542 | 11.3 | 2.26 | 1.49 | -- | -- | -- | 0.743 | 20.2 | -- | -- | -- | -- |
| 225.74 | 0.7 | 11.3 | 1.91 | -- | -1.36 | -- | -- | 0.48 | -- | 30.73 | 553 | -- | -- |
| 171.6 | 0.61 | 11.4 | -- | 1.31 | -2 | -- | -- | 0.458 | 20 | 18.92 | 35045 | -- | -- |
| 256.04 | 0.748 | 11.2 | 2.25 | -- | -- | -- | -- | 0.725 | -- | -- | -- | -- | -- |
| 268.76 | 0.767 | 11.3 | -- | 1.48 | -- | -- | -- | 0.491 | 20.3 | -- | -- | -- | -- |
| 283.88 | 0.785 | 11.4 | -- | -- | -2 | -- | -- | 0.148 | -- | 19.4 | 36690 | -- | -- |
| 389.45 | 0.921 | 11.3 | -- | -- | -- | -- | -- | 0.476 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.45 | humidity | 90.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 6 | 112.92 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 10 | 113.26 | temperature | 20.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 12 | 113.32 | humidity | 90.0 | 270 | < th | dose independent | sin | 1 | NA |
| 14 | 113.40 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 21 | 9 |
| 25 | 113.87 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 26 | 113.90 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 5 | 8 |
| 28 | 113.98 | humidity | 80.0 | 10 | > th | dose independent | rect. | 5 | 8 |
| 35 | 114.17 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 36 | 114.20 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 40 | 114.31 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 8 | 9 |
| 45 | 114.39 | temperature | 15.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 47 | 114.43 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 48 | 114.45 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 18 |
| 50 | 114.47 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 12 |
| 61 | 114.61 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 20 |
| 64 | 114.68 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 67 | 114.73 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 68 | 114.76 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 18 |
| 71 | 114.78 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 12 |
| 128 | 115.29 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 162 | 115.74 | humidity | 80.0 | 10 | < th | dose independent | rect. | 9 | 8 |
| 163 | 115.76 | radiation | 1.0 | 10 | < th | dose independent | sin | 9 | NA |
| 164 | 115.76 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 15 |
| 165 | 115.76 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 167 | 115.77 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 9 |
| 168 | 115.77 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 171 | 115.77 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 177 | 115.77 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 179 | 115.77 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 15 |
| 180 | 115.78 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 20 | 9 |
| 186 | 115.83 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 11 |
| 188 | 115.85 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 9 |
| 203 | 116.02 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 8 |
| 204 | 116.02 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 206 | 116.03 | radiation | 1.0 | 30 | < th | dose dependent | sin | 9 | NA |
| 230 | 116.18 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 20 | 9 |
| 236 | 116.25 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 268 | 116.54 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 15 |
| 286 | 116.75 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 290 | 116.79 | wind | 1.0 | 30 | > th | dose independent | rect. | 20 | 9 |
| 303 | 116.86 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 306 | 116.88 | humidity | 90.0 | 720 | < th | dose independent | rect. | 9 | 2 |
| 317 | 116.91 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 24 | 6 |
| 353 | 117.04 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 10 | 19 |
| 379 | 117.16 | humidity | 50.0 | 270 | > th | dose dependent | sin | 5 | NA |
| 412 | 117.31 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 9 | 8 |
| 414 | 117.33 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 415 | 117.33 | humidity | 90.0 | 10 | < th | dose dependent | sin | 0 | NA |
| 416 | 117.33 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 418 | 117.34 | temperature | 15.0 | 720 | > th | dose independent | rect. | 24 | 19 |
| 427 | 117.38 | humidity | 80.0 | 90 | < th | dose independent | rect. | 21 | 20 |
| 434 | 117.40 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 22 |
| 450 | 117.46 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 9 |
| 452 | 117.46 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 9 |
| 491 | 117.58 | humidity | 80.0 | 10 | > th | dose independent | rect. | 5 | 13 |
| 514 | 117.63 | humidity | 80.0 | 90 | < th | dose independent | rect. | 1 | 16 |
| 535 | 117.69 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 540 | 117.70 | humidity | 50.0 | 10 | > th | dose dependent | sin | 0 | NA |
| 543 | 117.72 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 16 |
| 547 | 117.73 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 558 | 117.76 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 9 | 13 |
| 576 | 117.80 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 9 | 5 |
| 588 | 117.84 | temperature | 15.0 | 720 | > th | dose independent | sin | 1 | NA |
| 595 | 117.84 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 599 | 117.85 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 2 | 10 |
| 616 | 117.88 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 24 | 11 |
| 657 | 117.93 | temperature | 15.0 | 90 | > th | dose independent | sin | 5 | NA |
| 663 | 117.94 | temperature | 15.0 | 90 | > th | dose independent | sin | 21 | NA |
| 665 | 117.94 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 17 |
| 668 | 117.95 | temperature | 15.0 | 270 | > th | dose independent | sin | 23 | NA |
| 690 | 118.00 | wind | 7.0 | 90 | < th | dose independent | rect. | 9 | 8 |
| 710 | 118.04 | temperature | 15.0 | 720 | > th | dose independent | sin | 11 | NA |
| 722 | 118.06 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 9 |
| 736 | 118.09 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 19 | 22 |
| 740 | 118.10 | humidity | 80.0 | 10 | < th | dose independent | rect. | 22 | 19 |
| 754 | 118.13 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 10 |
| 770 | 118.16 | temperature | 15.0 | 720 | > th | dose independent | rect. | 23 | 13 |
| 780 | 118.17 | humidity | 80.0 | 10 | < th | dose independent | sin | 0 | NA |
| 809 | 118.24 | humidity | 80.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 831 | 118.27 | temperature | 30.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 856 | 118.33 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 23 | 14 |
| 914 | 118.43 | humidity | 80.0 | 270 | > th | dose independent | sin | 6 | NA |
| 920 | 118.44 | temperature | 15.0 | 720 | > th | dose independent | rect. | 1 | 10 |
| 929 | 118.45 | humidity | 80.0 | 10 | < th | dose independent | rect. | 20 | 21 |
| 956 | 118.52 | humidity | 90.0 | 10 | < th | dose independent | rect. | 9 | 13 |
| 987 | 118.56 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 8 |