Os06g0710300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Uncharacterized protein UPF0114 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0710300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Uncharacterized protein UPF0114 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.94 | 0.495 | 14 | -0.52 | 0.781 | -1.24 | 0.0792 | -0.381 | -0.342 | 11.3 | 82.56 | 1258 | -- | -- |
| 111.04 | 0.491 | 14 | -0.488 | 0.764 | -1.28 | 0.114 | -- | -0.336 | 11.4 | 82.65 | 1230 | -- | -- |
| 110.9 | 0.49 | 14 | -0.514 | 0.765 | -1.26 | -- | -0.388 | -0.34 | 11.3 | 83 | 1232 | -- | -- |
| 111.09 | 0.491 | 14 | -0.49 | 0.751 | -1.29 | -- | -- | -0.338 | 11.4 | 82.78 | 1229 | -- | -- |
| 127.56 | 0.526 | 14 | -0.47 | -- | -1.88 | -- | 0.0388 | -0.334 | -- | 86.06 | 1017 | -- | -- |
| 147.02 | 0.568 | 14 | -0.689 | 0.974 | -- | 0.348 | -- | -0.304 | 11.8 | -- | -- | -- | -- |
| 147.54 | 0.569 | 14 | -0.675 | 0.972 | -- | -- | -- | -0.303 | 11.8 | -- | -- | -- | -- |
| 127.54 | 0.526 | 14 | -0.485 | -- | -1.88 | -- | -- | -0.338 | -- | 86 | 1019 | -- | -- |
| 116.97 | 0.504 | 14 | -- | 0.767 | -1.32 | -- | -- | -0.295 | 11.4 | 81.24 | 1243 | -- | -- |
| 207.02 | 0.672 | 14 | -0.703 | -- | -- | -- | -- | -0.315 | -- | -- | -- | -- | -- |
| 159.54 | 0.591 | 14 | -- | 0.98 | -- | -- | -- | -0.228 | 11.8 | -- | -- | -- | -- |
| 133.53 | 0.538 | 14 | -- | -- | -1.93 | -- | -- | -0.298 | -- | 85 | 1026 | -- | -- |
| 220.06 | 0.692 | 14 | -- | -- | -- | -- | -- | -0.237 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.45 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 3 | 110.56 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 8 | 110.95 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 16 | 111.30 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 36 | 111.82 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 50 | 112.15 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 86 | 112.79 | humidity | 50 | 1440 | > th | dose dependent | rect. | 10 | 12 |
| 132 | 113.31 | humidity | 50 | 1440 | > th | dose dependent | sin | 21 | NA |
| 139 | 113.36 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 146 | 113.38 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 156 | 113.48 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 186 | 113.67 | humidity | 90 | 1440 | < th | dose dependent | sin | 21 | NA |
| 240 | 113.89 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 324 | 114.28 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 355 | 114.42 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 373 | 114.49 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 382 | 114.52 | radiation | 1 | 1440 | < th | dose dependent | sin | 22 | NA |
| 391 | 114.55 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 13 |
| 395 | 114.56 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 400 | 114.57 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 403 | 114.57 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 422 | 114.60 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 20 |
| 442 | 114.66 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 452 | 114.68 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 464 | 114.70 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 22 |
| 474 | 114.71 | humidity | 80 | 1440 | < th | dose dependent | rect. | 21 | 23 |
| 488 | 114.73 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 500 | 114.74 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 14 |
| 544 | 114.77 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 593 | 114.84 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 605 | 114.85 | humidity | 80 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 656 | 114.91 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 662 | 114.91 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 700 | 114.98 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 875 | 115.24 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 882 | 115.25 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 11 |
| 885 | 115.26 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 937 | 115.35 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 983 | 115.47 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 985 | 115.47 | humidity | 80 | 720 | < th | dose dependent | sin | 13 | NA |