Os06g0709100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0709100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8.25 | 0.135 | 10.6 | -0.0901 | 0.433 | 0.374 | -0.187 | -0.0393 | 0.0253 | 7.97 | 23.6 | 5351 | -- | -- |
| 8.25 | 0.134 | 10.6 | -0.102 | 0.432 | 0.373 | -0.19 | -- | 0.0209 | 7.97 | 23.6 | 5364 | -- | -- |
| 8.34 | 0.135 | 10.6 | -0.091 | 0.433 | 0.374 | -- | -0.0498 | 0.027 | 7.94 | 23.57 | 5423 | -- | -- |
| 8.35 | 0.135 | 10.6 | -0.107 | 0.434 | 0.374 | -- | -- | 0.0191 | 7.94 | 23.6 | 5422 | -- | -- |
| 18.08 | 0.198 | 10.6 | -0.116 | -- | 0.423 | -- | 0.0943 | 0.0147 | -- | 24.3 | 3583 | -- | -- |
| 13.25 | 0.171 | 10.6 | -0.29 | 0.438 | -- | -0.184 | -- | -0.113 | 8.21 | -- | -- | -- | -- |
| 13.35 | 0.171 | 10.6 | -0.296 | 0.439 | -- | -- | -- | -0.113 | 8.18 | -- | -- | -- | -- |
| 17.99 | 0.198 | 10.6 | -0.103 | -- | 0.435 | -- | -- | 0.0318 | -- | 24.2 | 3583 | -- | -- |
| 8.41 | 0.135 | 10.6 | -- | 0.442 | 0.42 | -- | -- | 0.0729 | 7.98 | 23.7 | 8380 | -- | -- |
| 23.96 | 0.229 | 10.6 | -0.292 | -- | -- | -- | -- | -0.108 | -- | -- | -- | -- | -- |
| 15.66 | 0.185 | 10.6 | -- | 0.437 | -- | -- | -- | -0.0797 | 8.23 | -- | -- | -- | -- |
| 16.11 | 0.187 | 10.6 | -- | -- | 0.524 | -- | -- | 0.0565 | -- | 26.02 | 2070 | -- | -- |
| 26.21 | 0.239 | 10.6 | -- | -- | -- | -- | -- | -0.0751 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 7.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 20 |
| 2 | 7.82 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 20 |
| 18 | 7.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 25 | 7.97 | temperature | 15 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 26 | 7.97 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 3 |
| 33 | 7.99 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 3 |
| 53 | 8.04 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 19 |
| 93 | 8.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 14 |
| 97 | 8.09 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 22 |
| 100 | 8.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 105 | 8.10 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 115 | 8.11 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 146 | 8.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 211 | 8.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 284 | 8.24 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 299 | 8.24 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 16 |
| 377 | 8.27 | temperature | 20 | 1440 | > th | dose dependent | sin | 3 | NA |
| 401 | 8.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 23 |
| 402 | 8.27 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 23 |
| 468 | 8.29 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 627 | 8.32 | temperature | 10 | 1440 | > th | dose dependent | sin | 2 | NA |
| 729 | 8.33 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 794 | 8.34 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 802 | 8.35 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 826 | 8.35 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 17 |