Os06g0706400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peptide transporter PTR2-B (Histidine transporting protein).
FiT-DB / Search/ Help/ Sample detail
|
Os06g0706400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Peptide transporter PTR2-B (Histidine transporting protein).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 222.81 | 0.701 | 10.5 | 3.43 | 4.84 | -1.95 | 0.849 | 3.41 | 1.07 | 18.4 | 25.4 | 1355 | -- | -- |
| 229.85 | 0.706 | 10.6 | 2.89 | 4.86 | -1.77 | 1.01 | -- | 1.12 | 18.4 | 22.24 | 5690 | -- | -- |
| 224.58 | 0.698 | 10.5 | 3.4 | 4.84 | -1.95 | -- | 3.36 | 1.07 | 18.4 | 25.4 | 1351 | -- | -- |
| 228.77 | 0.704 | 10.6 | 2.58 | 4.87 | -1.83 | -- | -- | 0.9 | 18.3 | 25.5 | 5624 | -- | -- |
| 1431.74 | 1.76 | 10.4 | 3.43 | -- | -2.4 | -- | 3.23 | 1.16 | -- | 24.13 | 1326 | -- | -- |
| 332.57 | 0.855 | 10.7 | 1.96 | 4.93 | -- | 0.974 | -- | 0.686 | 18.3 | -- | -- | -- | -- |
| 334.91 | 0.857 | 10.7 | 1.95 | 4.93 | -- | -- | -- | 0.689 | 18.3 | -- | -- | -- | -- |
| 1435.48 | 1.76 | 10.5 | 2.53 | -- | -2.05 | -- | -- | 0.901 | -- | 24.4 | 1337 | -- | -- |
| 383.75 | 0.912 | 10.7 | -- | 4.84 | -0.936 | -- | -- | 0.561 | 18.3 | 28.16 | 7036 | -- | -- |
| 1596.07 | 1.87 | 10.6 | 1.82 | -- | -- | -- | -- | 0.583 | -- | -- | -- | -- | -- |
| 435.38 | 0.976 | 10.7 | -- | 4.9 | -- | -- | -- | 0.472 | 18.3 | -- | -- | -- | -- |
| 1547.74 | 1.83 | 10.6 | -- | -- | -1.42 | -- | -- | 0.378 | -- | 33.91 | 7032 | -- | -- |
| 1683.46 | 1.92 | 10.6 | -- | -- | -- | -- | -- | 0.381 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 208.02 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 2 | 209.82 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 14 | 210.71 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 15 | 213.08 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 16 | 213.33 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 36 | 214.21 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 40 | 214.98 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 13 |
| 41 | 215.12 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 68 | 223.12 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 95 | 223.51 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 117 | 224.30 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 20 | NA |
| 128 | 224.48 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 148 | 224.66 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 6 |
| 162 | 224.87 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 170 | 224.95 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 5 | 16 |
| 174 | 224.99 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 175 | 225.00 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 2 | 19 |
| 194 | 225.17 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 202 | 225.21 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 260 | 225.43 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 305 | 225.62 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 317 | 225.68 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 330 | 225.75 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 354 | 225.93 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 396 | 226.21 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 15 | 17 |
| 408 | 226.30 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 418 | 226.36 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 498 | 226.99 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 517 | 227.24 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 19 |
| 538 | 227.37 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 540 | 227.37 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 15 |
| 550 | 227.41 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 11 |
| 551 | 227.41 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 578 | 227.62 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 19 |
| 593 | 227.72 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 628 | 227.85 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 19 | 4 |
| 703 | 228.36 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 18 |
| 746 | 228.52 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 801 | 228.67 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |
| 877 | 228.89 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 967 | 229.20 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 987 | 229.30 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 11 |