Os06g0706000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0706000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 317.49 | 0.837 | 3.07 | -1.77 | 0.37 | 0.538 | -0.417 | -6.55 | -0.42 | 8.85 | 24.79 | 2685 | -- | -- |
| 332.54 | 0.849 | 2.86 | -0.0719 | 0.335 | 0.164 | -0.232 | -- | -0.0373 | 9.04 | -6.337 | 10854 | -- | -- |
| 317.86 | 0.83 | 3.07 | -1.85 | 0.383 | 0.593 | -- | -7.09 | -0.417 | 8.75 | 25.51 | 2685 | -- | -- |
| 332.63 | 0.849 | 2.86 | -0.103 | 0.335 | 0.18 | -- | -- | -0.0546 | 9.13 | -4.607 | 12647 | -- | -- |
| 325.77 | 0.841 | 3.07 | -1.69 | -- | 0.498 | -- | -6.5 | -0.377 | -- | 25.37 | 2684 | -- | -- |
| 333 | 0.855 | 2.85 | 0.0264 | 0.334 | -- | -0.219 | -- | 0.0118 | 8.9 | -- | -- | -- | -- |
| 333.15 | 0.855 | 2.85 | 0.0196 | 0.333 | -- | -- | -- | 0.012 | 9.06 | -- | -- | -- | -- |
| 338.99 | 0.861 | 2.86 | -0.0171 | -- | 0.198 | -- | -- | -0.0124 | -- | -1.829 | 18799 | -- | -- |
| 332.79 | 0.85 | 2.86 | -- | 0.335 | 0.113 | -- | -- | -0.0238 | 9.11 | 1.394 | 12576 | -- | -- |
| 339.55 | 0.861 | 2.86 | 0.0189 | -- | -- | -- | -- | 0.014 | -- | -- | -- | -- | -- |
| 333.16 | 0.854 | 2.85 | -- | 0.334 | -- | -- | -- | 0.00985 | 9.06 | -- | -- | -- | -- |
| 338.99 | 0.86 | 2.86 | -- | -- | 0.193 | -- | -- | -0.0099 | -- | -1.829 | 18799 | -- | -- |
| 339.56 | 0.86 | 2.86 | -- | -- | -- | -- | -- | 0.0119 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 302.93 | temperature | 25.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 4 | 303.23 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 5 | 303.24 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 7 | 304.44 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 8 | 304.86 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 9 | 305.25 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 19 | 309.77 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 21 | 309.88 | wind | 5.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 26 | 309.94 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 28 | 309.94 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 29 | 309.94 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 32 | 309.94 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 33 | 309.94 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 35 | 309.94 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 40 | 309.94 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 41 | 309.94 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 47 | 309.99 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 49 | 309.99 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 51 | 310.37 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 54 | 310.54 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 59 | 310.86 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 60 | 310.88 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 7 | 3 |
| 61 | 310.92 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 8 | 2 |
| 63 | 310.96 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 74 | 310.99 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 5 | 5 |
| 75 | 311.01 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 6 | 5 |
| 78 | 311.05 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 80 | 311.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 83 | 311.05 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 87 | 311.05 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 96 | 311.05 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 97 | 311.05 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 98 | 311.05 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 6 | 1 |
| 99 | 311.05 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 108 | 311.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 120 | 311.12 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 4 | 7 |
| 129 | 311.23 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 134 | 311.31 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 2 | 9 |
| 144 | 311.41 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 147 | 311.56 | temperature | 25.0 | 10 | > th | dose independent | rect. | 2 | 3 |
| 165 | 312.19 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 215 | 312.86 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 6 | 5 |
| 221 | 312.98 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 240 | 313.63 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 4 | 7 |
| 262 | 314.38 | wind | 7.0 | 30 | > th | dose independent | rect. | 19 | 1 |
| 265 | 314.40 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 2 | 9 |
| 268 | 314.43 | wind | 5.0 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 305 | 315.34 | wind | 1.0 | 30 | < th | dose dependent | rect. | 5 | 8 |
| 309 | 315.39 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 5 |
| 331 | 315.76 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 339 | 315.85 | wind | 1.0 | 30 | < th | dose dependent | rect. | 5 | 13 |
| 354 | 316.18 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 357 | 316.37 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 21 | 16 |
| 391 | 316.81 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 398 | 316.92 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 7 | NA |
| 404 | 316.99 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 407 | 317.01 | temperature | 25.0 | 10 | > th | dose independent | rect. | 22 | 8 |
| 410 | 317.04 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 23 | 13 |
| 411 | 317.07 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 23 |
| 412 | 317.07 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 445 | 317.58 | atmosphere | 1000.0 | 720 | < th | dose dependent | rect. | 22 | 4 |
| 453 | 317.62 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 6 | 7 |
| 460 | 317.68 | temperature | 25.0 | 1440 | > th | dose independent | sin | 7 | NA |
| 499 | 317.96 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 501 | 317.98 | atmosphere | 1000.0 | 720 | < th | dose dependent | rect. | 23 | 2 |
| 502 | 317.99 | wind | 1.0 | 30 | < th | dose independent | rect. | 5 | 7 |
| 552 | 318.53 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 566 | 318.58 | temperature | 25.0 | 1440 | < th | dose independent | sin | 7 | NA |
| 577 | 318.65 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 579 | 318.65 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 599 | 318.72 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 601 | 318.73 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 607 | 318.78 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 608 | 318.78 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 616 | 318.81 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 12 | NA |
| 623 | 318.84 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 648 | 318.95 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 19 |
| 651 | 318.96 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 16 | 13 |
| 665 | 318.99 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 16 | 10 |
| 717 | 319.13 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 720 | 319.13 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 4 |
| 729 | 319.16 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 733 | 319.16 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 743 | 319.19 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 19 |
| 789 | 319.31 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 17 |
| 800 | 319.34 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 803 | 319.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 821 | 319.39 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 893 | 319.52 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 17 | 3 |
| 926 | 319.60 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 23 | 3 |
| 930 | 319.60 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 935 | 319.61 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 943 | 319.62 | wind | 1.0 | 30 | < th | dose independent | rect. | 5 | 13 |
| 950 | 319.62 | temperature | 25.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 964 | 319.64 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 966 | 319.65 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 968 | 319.65 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 975 | 319.66 | temperature | 20.0 | 90 | < th | dose independent | rect. | 9 | 10 |
| 990 | 319.68 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 23 |