Os06g0705500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ataxin-2, C-terminal domain containing protein.
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Os06g0705500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ataxin-2, C-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.55 | 0.464 | 8.91 | 0.923 | 0.382 | 1.61 | -0.999 | -2.65 | 0.333 | 21 | 23.11 | 1196 | -- | -- |
| 109.16 | 0.487 | 8.83 | 1.61 | 0.454 | 1.27 | -1.07 | -- | 0.515 | 21.6 | 21.6 | 2620 | -- | -- |
| 100.93 | 0.468 | 8.92 | 0.875 | 0.395 | 1.63 | -- | -2.9 | 0.319 | 21.1 | 23.18 | 1194 | -- | -- |
| 105.76 | 0.479 | 8.83 | 1.68 | 0.4 | 1.37 | -- | -- | 0.519 | 21.5 | 22.4 | 1196 | -- | -- |
| 105.88 | 0.479 | 8.92 | 0.846 | -- | 1.8 | -- | -3.25 | 0.305 | -- | 22.97 | 1054 | -- | -- |
| 162.61 | 0.598 | 8.77 | 2.1 | 0.579 | -- | -0.82 | -- | 0.798 | 22.5 | -- | -- | -- | -- |
| 165.27 | 0.602 | 8.77 | 2.13 | 0.582 | -- | -- | -- | 0.799 | 22.8 | -- | -- | -- | -- |
| 111.72 | 0.492 | 8.83 | 1.65 | -- | 1.56 | -- | -- | 0.485 | -- | 21.5 | 1037 | -- | -- |
| 147.18 | 0.565 | 8.95 | -- | 0.512 | 2.41 | -- | -- | -0.0135 | 22.3 | 12.18 | 8341 | -- | -- |
| 186.22 | 0.638 | 8.75 | 2.14 | -- | -- | -- | -- | 0.803 | -- | -- | -- | -- | -- |
| 284.99 | 0.79 | 8.82 | -- | 0.6 | -- | -- | -- | 0.562 | 23.1 | -- | -- | -- | -- |
| 161.86 | 0.593 | 8.95 | -- | -- | 2.49 | -- | -- | -0.0232 | -- | 12.52 | 8118 | -- | -- |
| 307.4 | 0.818 | 8.81 | -- | -- | -- | -- | -- | 0.565 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 4 | 101.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 15 | 101.87 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 7 |
| 64 | 102.96 | temperature | 20 | 1440 | > th | dose dependent | sin | 19 | NA |
| 73 | 103.13 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 81 | 103.27 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 87 | 103.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 102 | 103.46 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 11 |
| 105 | 103.48 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 11 |
| 134 | 103.64 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 153 | 103.72 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 13 |
| 429 | 104.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 19 |
| 453 | 104.93 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 22 |
| 465 | 104.96 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 606 | 105.28 | temperature | 25 | 1440 | < th | dose independent | sin | 18 | NA |
| 607 | 105.28 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 19 |
| 765 | 105.70 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 18 |
| 797 | 105.81 | temperature | 25 | 1440 | > th | dose independent | sin | 18 | NA |
| 978 | 106.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 15 |