Os06g0704200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0704200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.4 | 0.374 | 10.4 | -2.4 | 0.705 | -0.395 | 0.307 | -0.499 | -0.983 | 22.8 | 24.39 | 209 | -- | -- |
| 64.59 | 0.374 | 10.4 | -2.5 | 0.732 | -0.395 | 0.366 | -- | -1 | 22.6 | 24.4 | 210 | -- | -- |
| 63.78 | 0.372 | 10.4 | -2.42 | 0.703 | -0.391 | -- | -0.464 | -0.985 | 22.7 | 24.4 | 210 | -- | -- |
| 64.6 | 0.374 | 10.4 | -2.54 | 0.703 | -0.419 | -- | -- | -1.03 | 22.8 | 24.3 | 210 | -- | -- |
| 82.07 | 0.422 | 10.4 | -2.49 | -- | -0.455 | -- | -0.127 | -1.04 | -- | 25.2 | 657 | -- | -- |
| 74.07 | 0.403 | 10.4 | -2.42 | 0.716 | -- | 0.202 | -- | -0.824 | 21.7 | -- | -- | -- | -- |
| 74.22 | 0.403 | 10.4 | -2.43 | 0.715 | -- | -- | -- | -0.824 | 21.7 | -- | -- | -- | -- |
| 77.54 | 0.41 | 10.5 | -2.66 | -- | -0.768 | -- | -- | -1.13 | -- | 25.3 | 719 | -- | -- |
| 228.57 | 0.704 | 10.4 | -- | 0.701 | 0.17 | -- | -- | -0.545 | 20.8 | 28.42 | 10 | -- | -- |
| 104.53 | 0.478 | 10.4 | -2.43 | -- | -- | -- | -- | -0.825 | -- | -- | -- | -- | -- |
| 230.17 | 0.71 | 10.4 | -- | 0.712 | -- | -- | -- | -0.553 | 21.4 | -- | -- | -- | -- |
| 254.57 | 0.743 | 10.4 | -- | -- | -0.371 | -- | -- | -0.726 | -- | 25.5 | 573 | -- | -- |
| 259.82 | 0.752 | 10.3 | -- | -- | -- | -- | -- | -0.556 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.64 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 6 |
| 6 | 57.18 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 5 |
| 7 | 57.27 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 2 |
| 11 | 57.57 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 31 | 58.54 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 43 | 59.03 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 20 |
| 63 | 59.37 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 68 | 59.46 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 81 | 59.63 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 82 | 59.63 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 18 |
| 96 | 59.76 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 23 | 16 |
| 121 | 60.21 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 131 | 60.32 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 154 | 60.54 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 174 | 60.78 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 211 | 61.14 | wind | 5.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 234 | 61.34 | wind | 5.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 266 | 61.57 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 270 | 61.58 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 287 | 61.63 | wind | 5.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 294 | 61.66 | wind | 5.0 | 270 | < th | dose independent | rect. | 22 | 15 |
| 337 | 61.84 | radiation | 20.0 | 30 | < th | dose independent | rect. | 5 | 4 |
| 387 | 62.07 | wind | 9.0 | 270 | < th | dose dependent | rect. | 20 | 7 |
| 392 | 62.09 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 401 | 62.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 405 | 62.12 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 409 | 62.15 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 410 | 62.16 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 5 | 6 |
| 416 | 62.18 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 420 | 62.19 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 426 | 62.20 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 430 | 62.21 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 11 | 18 |
| 438 | 62.23 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 13 | 8 |
| 439 | 62.23 | temperature | 25.0 | 270 | > th | dose independent | rect. | 20 | 19 |
| 444 | 62.24 | wind | 9.0 | 270 | < th | dose dependent | rect. | 23 | 2 |
| 446 | 62.25 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 482 | 62.27 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 505 | 62.30 | wind | 9.0 | 270 | < th | dose dependent | rect. | 22 | 15 |
| 522 | 62.31 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 526 | 62.32 | temperature | 25.0 | 270 | < th | dose independent | sin | 10 | NA |
| 540 | 62.34 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 20 |
| 542 | 62.34 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 552 | 62.38 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 558 | 62.40 | wind | 7.0 | 90 | < th | dose dependent | rect. | 23 | 5 |
| 563 | 62.41 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 10 |
| 594 | 62.42 | temperature | 25.0 | 270 | > th | dose independent | sin | 10 | NA |
| 597 | 62.42 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 611 | 62.44 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 659 | 62.50 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 696 | 62.57 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 699 | 62.57 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 702 | 62.58 | temperature | 15.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 704 | 62.58 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 714 | 62.60 | temperature | 25.0 | 10 | < th | dose dependent | sin | 23 | NA |
| 718 | 62.60 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 9 | 20 |
| 725 | 62.62 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 726 | 62.62 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 3 |
| 738 | 62.64 | humidity | 70.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 739 | 62.64 | radiation | 20.0 | 30 | < th | dose independent | rect. | 5 | 18 |
| 751 | 62.67 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 752 | 62.67 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 755 | 62.67 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 758 | 62.67 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 761 | 62.67 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 771 | 62.69 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 779 | 62.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 783 | 62.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 790 | 62.71 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 801 | 62.73 | humidity | 80.0 | 90 | > th | dose independent | rect. | 23 | 5 |
| 805 | 62.73 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 812 | 62.74 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 818 | 62.75 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 22 |
| 851 | 62.80 | humidity | 70.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 856 | 62.80 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 900 | 62.88 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 952 | 62.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 22 |
| 955 | 62.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 22 |
| 959 | 62.97 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 4 |
| 972 | 62.99 | wind | 7.0 | 90 | < th | dose dependent | rect. | 11 | 17 |
| 984 | 63.01 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 2 |