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Os06g0702600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Auxin response factor 7a (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.44 (0.0244) R2 : 0.184
β1 : 0.781 (0.0892) R2dD : 0.142 R2D : 0.0772
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.347 (0.052) R2dN8 : 0.106 R2N8 : 0.0412
σ : 0.457
deviance : 95.78
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
63.06 0.373 9.34 1.75 0.767 -1.12 -1.35 4.64 0.604 20.4 25.3 859 -- --
68.14 0.384 9.44 0.919 0.69 -0.672 -0.978 -- 0.4 20.4 25.2 928 -- --
67.89 0.384 9.36 1.66 0.732 -1.11 -- 3.96 0.536 20.2 26.17 911 -- --
70.46 0.391 9.44 0.958 0.683 -0.7 -- -- 0.403 20.4 25.26 911 -- --
85.38 0.43 9.32 1.78 -- -0.727 -- 2.96 0.62 -- 25.2 1365 -- --
79.18 0.417 9.45 0.754 0.49 -- -1.03 -- 0.352 20.3 -- -- -- --
82.28 0.425 9.45 0.787 0.499 -- -- -- 0.353 19.9 -- -- -- --
87.72 0.436 9.42 0.937 -- -0.454 -- -- 0.41 -- 24.93 1335 -- --
92.89 0.449 9.48 -- 0.586 -0.44 -- -- 0.251 20.3 27.34 937 -- --
95.78 0.457 9.44 0.781 -- -- -- -- 0.347 -- -- -- -- --
98.6 0.464 9.47 -- 0.493 -- -- -- 0.266 20 -- -- -- --
107.08 0.482 9.47 -- -- -0.333 -- -- 0.203 -- 33.8 1009 -- --
111.89 0.494 9.46 -- -- -- -- -- 0.26 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 63.47 temperature 25 720 > th dose dependent sin 17 NA
3 63.50 temperature 25 720 > th dose dependent rect. 10 15
8 63.58 radiation 1 720 > th dose independent rect. 17 13
28 63.94 radiation 1 720 > th dose independent rect. 17 2
54 64.07 temperature 25 720 > th dose dependent rect. 16 3
59 64.13 temperature 25 720 > th dose dependent rect. 14 22
75 64.37 temperature 25 720 > th dose dependent rect. 14 9
78 64.38 temperature 25 720 > th dose dependent rect. 13 11
85 64.41 radiation 1 720 < th dose independent rect. 16 9
126 64.58 radiation 1 720 < th dose independent rect. 6 18
136 64.59 temperature 25 720 > th dose dependent no NA NA
147 64.62 temperature 25 720 > th dose dependent rect. 17 1
268 65.36 radiation 1 720 > th dose independent rect. 9 20
273 65.44 radiation 1 720 > th dose independent rect. 9 10
309 65.74 temperature 10 720 > th dose dependent rect. 9 11
320 65.86 radiation 10 720 < th dose dependent rect. 16 8
327 65.89 radiation 1 720 < th dose dependent rect. 6 18
350 66.01 temperature 25 90 < th dose independent rect. 15 10
367 66.13 radiation 10 720 < th dose dependent rect. 14 10
378 66.23 radiation 1 720 < th dose independent sin 15 NA
402 66.35 temperature 30 270 < th dose dependent rect. 14 8
418 66.43 temperature 25 10 < th dose independent rect. 16 8
426 66.47 temperature 10 270 > th dose dependent rect. 9 19
432 66.49 temperature 30 720 < th dose dependent rect. 10 12
438 66.55 radiation 1 720 > th dose independent sin 15 NA
439 66.56 temperature 30 10 < th dose dependent rect. 14 10
442 66.57 temperature 30 720 < th dose dependent rect. 11 10
461 66.62 temperature 10 1440 > th dose dependent rect. 13 1
478 66.72 temperature 30 10 < th dose dependent sin 16 NA
499 66.80 temperature 25 270 < th dose independent rect. 16 6
504 66.80 temperature 15 270 > th dose dependent rect. 10 17
505 66.82 temperature 25 720 > th dose independent rect. 17 2
506 66.82 temperature 10 720 > th dose dependent sin 20 NA
519 66.87 temperature 30 720 < th dose dependent sin 20 NA
548 66.94 temperature 25 720 > th dose independent rect. 8 16
574 67.02 temperature 25 1440 > th dose dependent rect. 13 1
588 67.06 humidity 90 720 < th dose dependent rect. 17 2
611 67.11 humidity 90 720 < th dose dependent rect. 16 5
635 67.18 radiation 1 720 < th dose independent rect. 4 14
672 67.27 radiation 10 720 < th dose dependent rect. 16 1
675 67.27 temperature 30 10 < th dose dependent rect. 12 12
677 67.28 temperature 25 10 < th dose independent rect. 14 10
680 67.29 temperature 25 720 < th dose independent rect. 8 16
682 67.29 humidity 90 720 < th dose dependent rect. 16 12
703 67.34 radiation 1 720 < th dose dependent rect. 4 14
705 67.35 humidity 80 1440 < th dose independent sin 3 NA
727 67.39 humidity 50 720 > th dose dependent rect. 16 8
739 67.40 humidity 80 1440 > th dose independent rect. 1 18
811 67.51 humidity 80 1440 > th dose independent sin 2 NA
832 67.55 radiation 1 720 > th dose independent rect. 16 22
837 67.56 humidity 80 1440 < th dose independent rect. 2 17
841 67.57 temperature 25 90 < th dose independent sin 17 NA
865 67.61 humidity 80 1440 > th dose independent rect. 6 13
866 67.61 humidity 80 1440 < th dose independent rect. 6 13
870 67.61 wind 9 43200 > th dose dependent rect. 14 14
874 67.62 radiation 1 720 > th dose dependent rect. 17 13
888 67.64 wind 9 43200 < th dose independent rect. 14 17
922 67.69 wind 9 43200 > th dose independent sin 15 NA
924 67.69 wind 9 43200 > th dose independent rect. 14 17
931 67.69 temperature 30 10 < th dose dependent rect. 6 18
936 67.71 wind 9 43200 > th dose independent rect. 15 13
937 67.71 humidity 80 1440 < th dose independent rect. 23 16
964 67.75 humidity 80 1440 < th dose independent rect. 1 14
980 67.78 wind 9 43200 > th dose independent rect. 15 10
983 67.78 wind 9 43200 > th dose dependent rect. 12 16
988 67.79 wind 9 43200 < th dose independent rect. 14 15