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Os06g0702000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Auxin responsive SAUR protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.79 (0.0379) R2 : 0.836
β1 : -1.78 (0.142) R2dD : 0.0641 R2D : 0.037
β2 : 3.63 (0.0929) R2dC : 0.602 R2C : 0.714
β3 : -2.35 (0.177) R2dE : 0.0828 R2E : 0.164
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0413 (0.0853) R2dN8 : 0.000143 R2N8 : -0.000135
σ : 0.697
deviance : 221.06
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C
peak time of C : 10.4
E
wheather : temperature
threshold : 24.64
memory length : 11
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
213.03 0.686 6.78 -1.67 3.62 -2.39 -1.53 -0.347 0.0497 10.3 24.71 11 -- --
212.84 0.685 6.79 -1.72 3.62 -2.36 -1.43 -- 0.0386 10.3 24.71 11 -- --
220.38 0.697 6.8 -1.86 3.64 -2.3 -- 0.62 0.0196 10.4 24.71 11 -- --
221.06 0.697 6.79 -1.78 3.63 -2.35 -- -- 0.0413 10.4 24.64 11 -- --
941.81 1.44 6.99 -2.48 -- -3.97 -- 1.68 -0.388 -- 29.32 11 -- --
295.12 0.805 6.68 -1.17 3.97 -- -1.37 -- 0.478 10.6 -- -- -- --
302.83 0.815 6.68 -1.23 3.97 -- -- -- 0.474 10.6 -- -- -- --
937.4 1.43 6.98 -2.23 -- -4.12 -- -- -0.414 -- 27.32 9 -- --
296.79 0.802 6.72 -- 3.74 -1.68 -- -- 0.348 10.5 24.64 2 -- --
1274.61 1.67 6.79 -1.3 -- -- -- -- 0.454 -- -- -- -- --
342.6 0.866 6.65 -- 3.98 -- -- -- 0.611 10.7 -- -- -- --
1060.19 1.52 6.9 -- -- -3.49 -- -- -0.0494 -- 27.41 6 -- --
1319.42 1.7 6.75 -- -- -- -- -- 0.599 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 207.92 temperature 10 720 > th dose dependent rect. 19 4
3 208.24 temperature 10 720 > th dose dependent rect. 18 6
7 209.88 temperature 25 10 < th dose dependent rect. 22 23
16 211.48 temperature 25 10 < th dose dependent rect. 16 22
32 212.70 temperature 25 10 < th dose dependent rect. 13 23
33 212.76 temperature 10 720 > th dose dependent rect. 11 19
35 212.80 temperature 10 720 > th dose dependent rect. 18 13
38 212.92 temperature 25 10 < th dose dependent rect. 1 23
40 213.24 temperature 25 10 < th dose dependent rect. 9 23
46 213.53 temperature 25 10 < th dose dependent no NA NA
48 213.69 temperature 25 30 < th dose dependent rect. 5 23
49 213.75 temperature 25 10 < th dose dependent rect. 7 23
50 213.78 temperature 25 10 < th dose dependent rect. 11 23
54 213.89 temperature 25 10 < th dose dependent rect. 19 23
79 214.84 temperature 10 720 > th dose dependent sin 14 NA
82 214.97 temperature 25 10 < th dose dependent rect. 3 23
94 215.58 temperature 25 720 < th dose dependent rect. 8 18
179 218.23 temperature 30 720 < th dose dependent rect. 14 14
192 218.53 temperature 25 1440 < th dose dependent rect. 21 1
205 218.76 temperature 30 720 < th dose dependent rect. 15 12
268 219.84 temperature 25 720 < th dose dependent sin 18 NA
290 220.02 temperature 25 10 < th dose dependent rect. 17 15
322 220.44 temperature 25 10 < th dose dependent rect. 17 13
332 220.49 temperature 25 1440 < th dose dependent rect. 17 8
392 221.13 temperature 25 1440 < th dose dependent sin 14 NA
428 221.41 temperature 20 10 > th dose independent rect. 20 11
806 223.29 temperature 25 1440 < th dose dependent rect. 17 22
865 223.52 temperature 25 1440 < th dose dependent no NA NA
877 223.54 temperature 25 1440 < th dose dependent rect. 4 23
887 223.59 temperature 25 1440 < th dose dependent rect. 20 23
920 223.70 temperature 25 1440 < th dose dependent rect. 1 23