Os06g0700500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF266, plant family protein.
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Os06g0700500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF266, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.43 | 0.232 | 9.86 | -0.412 | 0.767 | 0.488 | 0.248 | -1.93 | 0.0881 | 22.2 | 10.01 | 4480 | -- | -- |
| 27.8 | 0.246 | 9.79 | 0.00513 | 0.754 | 0.577 | 0.314 | -- | 0.181 | 22.1 | 11.67 | 6737 | -- | -- |
| 24.67 | 0.231 | 9.86 | -0.423 | 0.766 | 0.491 | -- | -1.93 | 0.0876 | 22.2 | 9.952 | 4511 | -- | -- |
| 28.03 | 0.247 | 9.79 | -0.0207 | 0.743 | 0.608 | -- | -- | 0.171 | 22.2 | 8.552 | 6630 | -- | -- |
| 55.29 | 0.346 | 9.83 | -0.46 | -- | 0.708 | -- | -1.91 | 0.0484 | -- | 15.65 | 2302 | -- | -- |
| 33.79 | 0.273 | 9.76 | 0.289 | 0.773 | -- | 0.278 | -- | 0.319 | 22.3 | -- | -- | -- | -- |
| 34.1 | 0.273 | 9.76 | 0.278 | 0.771 | -- | -- | -- | 0.318 | 22.3 | -- | -- | -- | -- |
| 52.18 | 0.336 | 9.77 | 0.00799 | -- | 1.07 | -- | -- | 0.154 | -- | 9.263 | 806 | -- | -- |
| 28.04 | 0.247 | 9.79 | -- | 0.743 | 0.595 | -- | -- | 0.176 | 22.2 | 8.494 | 6629 | -- | -- |
| 70.3 | 0.392 | 9.74 | 0.29 | -- | -- | -- | -- | 0.32 | -- | -- | -- | -- | -- |
| 36.14 | 0.281 | 9.76 | -- | 0.773 | -- | -- | -- | 0.287 | 22.3 | -- | -- | -- | -- |
| 52.18 | 0.336 | 9.78 | -- | -- | 1.07 | -- | -- | 0.153 | -- | 9.09 | 806 | -- | -- |
| 72.52 | 0.397 | 9.74 | -- | -- | -- | -- | -- | 0.288 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.85 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 2 | 23.02 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 3 | 23.22 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 4 | 23.22 | humidity | 70 | 43200 | < th | dose dependent | rect. | 19 | 18 |
| 11 | 23.26 | humidity | 70 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 13 | 23.26 | humidity | 70 | 43200 | < th | dose dependent | rect. | 24 | 13 |
| 30 | 23.32 | humidity | 70 | 43200 | < th | dose dependent | sin | 7 | NA |
| 35 | 23.34 | humidity | 70 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 38 | 23.35 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 18 |
| 56 | 23.38 | humidity | 80 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 68 | 23.39 | humidity | 70 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 81 | 23.41 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 82 | 23.41 | humidity | 70 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 104 | 23.45 | humidity | 70 | 43200 | > th | dose independent | rect. | 20 | 14 |
| 107 | 23.46 | humidity | 60 | 43200 | > th | dose independent | sin | 8 | NA |
| 125 | 23.48 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 135 | 23.49 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 152 | 23.50 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 8 |
| 162 | 23.51 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 18 |
| 166 | 23.51 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 207 | 23.56 | humidity | 60 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 212 | 23.57 | humidity | 60 | 43200 | < th | dose independent | sin | 7 | NA |
| 227 | 23.57 | humidity | 60 | 43200 | < th | dose dependent | rect. | 12 | 21 |
| 232 | 23.58 | humidity | 50 | 43200 | > th | dose independent | rect. | 15 | 19 |
| 286 | 23.63 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 325 | 23.64 | humidity | 70 | 43200 | < th | dose dependent | rect. | 4 | 21 |
| 396 | 23.66 | humidity | 50 | 43200 | > th | dose independent | sin | 11 | NA |
| 405 | 23.66 | humidity | 60 | 43200 | < th | dose dependent | no | NA | NA |
| 489 | 23.67 | humidity | 60 | 43200 | < th | dose dependent | sin | 22 | NA |
| 586 | 23.69 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 598 | 23.69 | humidity | 60 | 43200 | < th | dose dependent | rect. | 12 | 10 |
| 603 | 23.69 | humidity | 60 | 43200 | < th | dose dependent | rect. | 12 | 13 |
| 623 | 23.70 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 666 | 23.71 | humidity | 60 | 43200 | < th | dose dependent | rect. | 12 | 7 |
| 677 | 23.72 | humidity | 70 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 766 | 23.74 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 804 | 23.75 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 4 |
| 857 | 23.77 | humidity | 50 | 43200 | < th | dose independent | rect. | 15 | 20 |
| 870 | 23.78 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 871 | 23.78 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 880 | 23.78 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 900 | 23.79 | humidity | 50 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 908 | 23.79 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 16 |
| 924 | 23.80 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 937 | 23.80 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 982 | 23.82 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 2 |